Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G473600.1 | Wheat | nucleus | 90.19 | 90.19 |
| TraesCSU01G040900.1 | Wheat | nucleus | 89.49 | 89.49 |
| TraesCS7B01G422000.1 | Wheat | nucleus | 86.51 | 87.74 |
| TraesCS7B01G422100.1 | Wheat | nucleus | 85.99 | 85.99 |
| TraesCS3A01G473800.1 | Wheat | nucleus | 77.93 | 78.9 |
| TraesCS7B01G408600.1 | Wheat | cytosol | 18.74 | 78.68 |
| TraesCS7B01G421000.1 | Wheat | cytosol | 14.19 | 75.7 |
| TraesCS7B01G420800.1 | Wheat | cytosol | 14.01 | 74.77 |
| TraesCS7B01G461400.1 | Wheat | nucleus | 30.47 | 68.77 |
| HORVU7Hr1G114450.2 | Barley | nucleus | 69.35 | 66.55 |
| TraesCS7B01G408700.1 | Wheat | nucleus | 61.47 | 55.71 |
| TraesCS7B01G420900.1 | Wheat | nucleus | 47.46 | 54.75 |
| TraesCS7B01G461300.1 | Wheat | nucleus, plastid | 24.34 | 41.99 |
| KRH16193 | Soybean | nucleus | 12.96 | 36.63 |
| KRH33116 | Soybean | cytosol | 17.86 | 35.79 |
| TraesCS6B01G174400.1 | Wheat | nucleus | 31.87 | 29.26 |
| GSMUA_Achr10P... | Banana | nucleus | 20.84 | 27.42 |
| Solyc07g005140.2.1 | Tomato | nucleus | 31.52 | 27.07 |
| PGSC0003DMT400020233 | Potato | nucleus | 31.7 | 25.6 |
| CDY02794 | Canola | nucleus | 21.37 | 25.58 |
| Solyc12g010330.1.1 | Tomato | nucleus | 31.0 | 25.0 |
| TraesCS7B01G049000.1 | Wheat | nucleus | 25.92 | 23.72 |
| KRH03086 | Soybean | nucleus | 28.2 | 23.64 |
| PGSC0003DMT400008290 | Potato | nucleus | 31.52 | 23.29 |
| TraesCS7B01G049200.1 | Wheat | nucleus | 26.44 | 22.98 |
| KRH20086 | Soybean | nucleus | 26.8 | 22.5 |
| TraesCS3B01G423600.1 | Wheat | nucleus | 22.94 | 22.43 |
| TraesCS6B01G392000.1 | Wheat | nucleus | 26.44 | 22.4 |
| AT5G58080.1 | Thale cress | nucleus | 24.69 | 22.2 |
| Bra020390.1-P | Field mustard | nucleus | 23.99 | 21.99 |
| CDY32725 | Canola | nucleus | 23.99 | 21.99 |
| CDY02793 | Canola | nucleus | 23.99 | 21.89 |
| TraesCS3B01G394200.1 | Wheat | nucleus, plastid | 8.23 | 20.89 |
| TraesCS4B01G240100.1 | Wheat | nucleus | 24.52 | 20.47 |
| TraesCS1B01G268900.1 | Wheat | nucleus | 8.76 | 16.23 |
| TraesCS3B01G594300.1 | Wheat | nucleus | 7.71 | 15.33 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | GO:GO:0000160 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00072 |
| PFAM:PF00249 | PIRSF:PIRSF036392 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF7 |
| InterPro:Response_reg_B-typ_pln | InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver |
| TIGRFAMs:TIGR01557 | EnsemblPlantsGene:TraesCS3B01G517000 | EnsemblPlants:TraesCS3B01G517000.1 | TIGR:cd00156 | SEG:seg | : |
Description
No Description!
Coordinates
chr3B:-:760051453..760055821
Molecular Weight (calculated)
63953.5 Da
IEP (calculated)
6.110
GRAVY (calculated)
-0.544
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: MATMGGDRRQ MMEDAAEDKF PEGLRVLVVD DDRVCLKVLE ALLRRCKYQP TTVRDGNTAL RMLMAGKQQF DLVIIDVRMP DMDGFKLLEL IRLEMDLPVI
101: MLSADCDKKV VMKGIDHGAS DFMVKPVCTH ELKNIWQHVQ RWRNPKAISH ISDHDSDVQR VQSATADKSK LSGNKRNVGD DSNEHNESTY ISATHSKPRV
201: TWTIELHNKF LEAINQIGLD RAVPKKVLEL MNVDYLSREN IASHLQKYRL HLKRVNSNPC GNAYERWNSS YNMNNKGNFM HNHEHGRWSV SSSDTASWST
301: NNYSATGHLA PPMNIQSNSY MGSYLHDGRM PRYVGKQLAD ARRFTGFGDP PVSLYNNIPN EIMLDEFPSF NNSNYYADLM CGKLMEISKG KTPSNRQSSF
401: ANTTIGGGRS LVASQVNFPH INQLESYAMS SGRLPLQNEK ATFISNTTSM GGFTEQMAPF NMASNTSSVG MMLNGSSALD ASRTSTEDTH LVNSEGTTSM
501: LHNLQTNNFF SLTQPLDGGD GASILPMQEG TLDQQPLNDQ PNEINAFSMD DIFSNMHLED FMGDDAIVEE A
101: MLSADCDKKV VMKGIDHGAS DFMVKPVCTH ELKNIWQHVQ RWRNPKAISH ISDHDSDVQR VQSATADKSK LSGNKRNVGD DSNEHNESTY ISATHSKPRV
201: TWTIELHNKF LEAINQIGLD RAVPKKVLEL MNVDYLSREN IASHLQKYRL HLKRVNSNPC GNAYERWNSS YNMNNKGNFM HNHEHGRWSV SSSDTASWST
301: NNYSATGHLA PPMNIQSNSY MGSYLHDGRM PRYVGKQLAD ARRFTGFGDP PVSLYNNIPN EIMLDEFPSF NNSNYYADLM CGKLMEISKG KTPSNRQSSF
401: ANTTIGGGRS LVASQVNFPH INQLESYAMS SGRLPLQNEK ATFISNTTSM GGFTEQMAPF NMASNTSSVG MMLNGSSALD ASRTSTEDTH LVNSEGTTSM
501: LHNLQTNNFF SLTQPLDGGD GASILPMQEG TLDQQPLNDQ PNEINAFSMD DIFSNMHLED FMGDDAIVEE A
001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
Arabidopsis Description
ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.