Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G473600.1 | Wheat | nucleus | 84.04 | 83.01 |
| TraesCSU01G040900.1 | Wheat | nucleus | 79.26 | 78.28 |
| TraesCS3B01G517000.1 | Wheat | nucleus | 78.9 | 77.93 |
| TraesCS7A01G511100.1 | Wheat | nucleus | 76.6 | 75.66 |
| TraesCS7A01G511300.1 | Wheat | nucleus | 76.24 | 75.31 |
| TraesCS7B01G422000.1 | Wheat | nucleus | 74.65 | 74.78 |
| TraesCS7A01G539700.1 | Wheat | cytosol, nucleus, plastid | 13.83 | 70.27 |
| TraesCS7A01G510400.1 | Wheat | cytosol | 10.46 | 70.24 |
| HORVU7Hr1G114450.2 | Barley | nucleus | 61.52 | 58.32 |
| TraesCS7A01G510300.1 | Wheat | nucleus | 44.33 | 50.1 |
| TraesCS7A01G502300.1 | Wheat | nucleus | 48.05 | 47.8 |
| TraesCS7A01G539600.1 | Wheat | nucleus | 20.04 | 33.43 |
| KRH33116 | Soybean | cytosol | 15.96 | 31.58 |
| KRH16193 | Soybean | nucleus | 10.82 | 30.2 |
| TraesCS6A01G146200.3 | Wheat | nucleus | 28.19 | 24.84 |
| GSMUA_Achr10P... | Banana | nucleus | 17.55 | 22.81 |
| Solyc07g005140.2.1 | Tomato | nucleus | 26.42 | 22.41 |
| PGSC0003DMT400020233 | Potato | nucleus | 26.77 | 21.36 |
| CDY02794 | Canola | nucleus | 17.91 | 21.17 |
| Solyc12g010330.1.1 | Tomato | nucleus | 26.24 | 20.9 |
| TraesCS7A01G146400.1 | Wheat | nucleus | 22.7 | 20.85 |
| TraesCS7A01G146500.1 | Wheat | nucleus | 22.34 | 20.83 |
| TraesCS7A01G146700.1 | Wheat | nucleus | 23.05 | 19.73 |
| KRH03086 | Soybean | nucleus | 23.76 | 19.68 |
| PGSC0003DMT400008290 | Potato | nucleus | 26.6 | 19.4 |
| KRH20086 | Soybean | nucleus | 23.23 | 19.26 |
| TraesCS6A01G359200.1 | Wheat | nucleus | 22.87 | 19.08 |
| AT5G58080.1 | Thale cress | nucleus | 21.45 | 19.06 |
| TraesCS3A01G391600.1 | Wheat | nucleus | 19.5 | 18.84 |
| Bra020390.1-P | Field mustard | nucleus | 20.74 | 18.78 |
| CDY32725 | Canola | nucleus | 20.74 | 18.78 |
| CDY02793 | Canola | nucleus | 20.74 | 18.69 |
| TraesCS4A01G063100.1 | Wheat | nucleus | 20.04 | 16.52 |
| TraesCS3A01G361800.1 | Wheat | nucleus, plastid | 5.14 | 12.89 |
| TraesCS1A01G258400.1 | Wheat | nucleus | 6.38 | 11.54 |
| TraesCS3A01G526600.1 | Wheat | nucleus | 5.32 | 10.53 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:Myb_dom_plants | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF7 | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 |
| EnsemblPlantsGene:TraesCS3A01G473800 | EnsemblPlants:TraesCS3A01G473800.1 | TIGR:cd00156 | : | : | : |
Description
No Description!
Coordinates
chr3A:-:704776555..704781718
Molecular Weight (calculated)
62863.6 Da
IEP (calculated)
6.679
GRAVY (calculated)
-0.524
Length
564 amino acids
Sequence
(BLAST)
(BLAST)
001: MATMGGDRRQ MMEDAAEDKF PEGLRILVVD DDRVCLTVLE ALLRRCKYQP TTVMDAKTAL RMLMAGKQQF DLVITDVRMP DMDGFKLLEL IRLEMNLPVI
101: STLTALNPKL MASYPAIRPI GWRVGRESGG GVTHELVGDI LSVSSPNQWH PIQPSVRSDG EWGGRAEVER HMMLSVDCDK KVVMKGIEQG ASEFMVKPVH
201: THELKNIWQH VQRWRNPKAI SHISDHDSDV QRVQPATADK SKLSGNKRNV GDDSNKHNES TCVSATHRKP RVTWTIQLHN KFLEAINQIG LDRAVPKKKY
301: RLHLKKVNSN HSGDAYERWN SSYNMNNKGN FMHNHEHGRW SHLAPAMNNQ SNFDMGSYLH DGRMLSNSYA DLMCGKLMEI SKGKTPSNCQ SSFANTTVGG
401: GRSLVASQVN FPQINQLESY AMSSGRLPLQ NEKAPFISNT ALVGGFTEQM APFNMASNTS SVGTMLNGSS ALDASRTSTK DNHLVNSERT TSMLHNLQTD
501: DFFSLTQLLD GGDGASILPM QEGTLDQQPL NDQLNEINAF SVDDIFSNMN LEDFTGDDPI VEEA
101: STLTALNPKL MASYPAIRPI GWRVGRESGG GVTHELVGDI LSVSSPNQWH PIQPSVRSDG EWGGRAEVER HMMLSVDCDK KVVMKGIEQG ASEFMVKPVH
201: THELKNIWQH VQRWRNPKAI SHISDHDSDV QRVQPATADK SKLSGNKRNV GDDSNKHNES TCVSATHRKP RVTWTIQLHN KFLEAINQIG LDRAVPKKKY
301: RLHLKKVNSN HSGDAYERWN SSYNMNNKGN FMHNHEHGRW SHLAPAMNNQ SNFDMGSYLH DGRMLSNSYA DLMCGKLMEI SKGKTPSNCQ SSFANTTVGG
401: GRSLVASQVN FPQINQLESY AMSSGRLPLQ NEKAPFISNT ALVGGFTEQM APFNMASNTS SVGTMLNGSS ALDASRTSTK DNHLVNSERT TSMLHNLQTD
501: DFFSLTQLLD GGDGASILPM QEGTLDQQPL NDQLNEINAF SVDDIFSNMN LEDFTGDDPI VEEA
001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
Arabidopsis Description
ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.