Factsheet for TraesCS3A01G361800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G355500.1	Wheat	nucleus, plastid	94.67	93.83
TraesCS3B01G394200.1	Wheat	nucleus, plastid	92.44	92.44
HORVU3Hr1G086000.1	Barley	nucleus	91.56	90.35
Os01t0844900-01	Rice	nucleus	52.89	54.34
KXG33682	Sorghum	mitochondrion, nucleus	57.33	47.08
Zm00001d042892_P001	Maize	nucleus	50.22	37.17
TraesCS3A01G526600.1	Wheat	nucleus	35.56	28.07
TraesCS1A01G258400.1	Wheat	nucleus	34.67	25.0
TraesCS7A01G146500.1	Wheat	nucleus	26.67	9.92
TraesCS7A01G146400.1	Wheat	nucleus	26.22	9.61
TraesCS4A01G063100.1	Wheat	nucleus	28.44	9.36
TraesCS6A01G359200.1	Wheat	nucleus	27.56	9.17
TraesCS7A01G146700.1	Wheat	nucleus	25.78	8.8
TraesCS3A01G391600.1	Wheat	nucleus	22.67	8.73
TraesCS7A01G510300.1	Wheat	nucleus	19.11	8.62
TraesCS6A01G146200.3	Wheat	nucleus	23.56	8.28
TraesCS7A01G511300.1	Wheat	nucleus	20.44	8.06
TraesCS7A01G511100.1	Wheat	nucleus	20.0	7.88
TraesCS7A01G502300.1	Wheat	nucleus	19.56	7.76
TraesCS3A01G473600.1	Wheat	nucleus	19.11	7.53
TraesCS7A01G539600.1	Wheat	nucleus	9.78	6.51
TraesCS3A01G473800.1	Wheat	nucleus	12.89	5.14
TraesCS7A01G539700.1	Wheat	cytosol, nucleus, plastid	2.22	4.5
TraesCS7A01G510400.1	Wheat	cytosol	1.33	3.57

Protein Annotations

EnsemblPlants:TraesCS3A01G361800.1	EnsemblPlantsGene:TraesCS3A01G361800	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	InterPro:SANT/Myb
PANTHER:PTHR31442	PFAM:PF00249	PFscan:PS51294	SEG:seg	SUPFAM:SSF46689	TIGRFAMs:TIGR01557
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:609959443..609960120

Molecular Weight (calculated)

24234.4 Da

IEP (calculated)

6.236

GRAVY (calculated)

-0.568

Length

225 amino acids

Sequence
(BLAST)

001: MLSPRVVRPQ PHDGAASAGS SSSRRHMVDR VSEWELGLPS PAELTPVSQP LIPPALAAAF GIGPADALAS PADAAGFLHD SPTSHLAPRF DEYDEEDEEE
101: GEGEDEEAAA PGGRRGGGKK ARMVWTPELH HRFVEAVEHL GEKGAVPKAI VRLMNVDGLT RENVASHLQK YRLYLKRSSP GAAAPSPPPP PFFPRFDVQR
201: PHQGSANRGG YCAYPYVSYQ KLGCD

Best Arabidopsis Sequence Match ( AT5G59570.1 )
(BLAST)

001: MGKEVMVSDY GDDDGEDAGG GDEYRIPEWE IGLPNGDDLT PLSQYLVPSI LALAFSMIPE RSRTIHDVNR ASQITLSSLR SSTNASSVME EVVDRVESSV
101: PGSDPKKQKK SDGGEAAAVE DSTAEEGDSG PEDASGKTSK RPRLVWTPQL HKRFVDVVAH LGIKNAVPKT IMQLMNVEGL TRENVASHLQ KYRLYLKRIQ
201: GLTTEEDPYS SSDQLFSSTP VPPQSFQDGG GSNGKLGVPV PVPSMVPIPG YGNQMGMQGY YQQYSNHGNE SNQYMMQQNK FGTMVTYPSV GGGDVNDK

Arabidopsis Description

BOATranscription factor BOA [Source:UniProtKB/Swiss-Prot;Acc:Q9LTH4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.