Factsheet for TraesCS3A01G473600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G040900.1	Wheat	nucleus	91.07	91.07
TraesCS3B01G517000.1	Wheat	nucleus	90.19	90.19
TraesCS7B01G422000.1	Wheat	nucleus	85.81	87.03
TraesCS7A01G511300.1	Wheat	nucleus	86.69	86.69
TraesCS7A01G511100.1	Wheat	nucleus	86.69	86.69
TraesCS3A01G473800.1	Wheat	nucleus	83.01	84.04
TraesCS7A01G510400.1	Wheat	cytosol	10.68	72.62
TraesCS7A01G539700.1	Wheat	cytosol, nucleus, plastid	13.84	71.17
HORVU7Hr1G114450.2	Barley	nucleus	70.23	67.39
TraesCS7A01G502300.1	Wheat	nucleus	55.87	56.26
TraesCS7A01G510300.1	Wheat	nucleus	48.86	55.91
TraesCS7A01G539600.1	Wheat	nucleus	27.5	46.45
KRH16193	Soybean	nucleus	13.13	37.13
KRH33116	Soybean	cytosol	18.04	36.14
TraesCS6A01G146200.3	Wheat	nucleus	31.7	28.28
GSMUA_Achr10P...	Banana	nucleus	20.84	27.42
Solyc07g005140.2.1	Tomato	nucleus	30.82	26.47
PGSC0003DMT400020233	Potato	nucleus	30.82	24.89
CDY02794	Canola	nucleus	20.67	24.74
TraesCS7A01G146400.1	Wheat	nucleus	26.44	24.59
TraesCS7A01G146500.1	Wheat	nucleus	25.92	24.46
Solyc12g010330.1.1	Tomato	nucleus	30.3	24.43
KRH03086	Soybean	nucleus	28.2	23.64
TraesCS7A01G146700.1	Wheat	nucleus	26.8	23.22
PGSC0003DMT400008290	Potato	nucleus	31.0	22.9
TraesCS6A01G359200.1	Wheat	nucleus	26.97	22.78
KRH20086	Soybean	nucleus	26.97	22.65
TraesCS3A01G391600.1	Wheat	nucleus	22.59	22.09
AT5G58080.1	Thale cress	nucleus	24.17	21.73
Bra020390.1-P	Field mustard	nucleus	23.47	21.51
CDY32725	Canola	nucleus	23.47	21.51
CDY02793	Canola	nucleus	23.47	21.41
TraesCS4A01G063100.1	Wheat	nucleus	23.82	19.88
TraesCS3A01G361800.1	Wheat	nucleus, plastid	7.53	19.11
TraesCS1A01G258400.1	Wheat	nucleus	8.41	15.38
TraesCS3A01G526600.1	Wheat	nucleus	7.53	15.09

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072
PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF7
InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver
TIGRFAMs:TIGR01557	EnsemblPlantsGene:TraesCS3A01G473600	EnsemblPlants:TraesCS3A01G473600.1	TIGR:cd00156	SEG:seg	:

Description

No Description!

Coordinates

chr3A:-:704691056..704695667

Molecular Weight (calculated)

64162.8 Da

IEP (calculated)

6.423

GRAVY (calculated)

-0.581

Length

571 amino acids

Sequence
(BLAST)

001: MATMGGDRRQ MMEDAAEDKF PEGLRILVVD DDRVCLTVLE ALLRRCKYQP TTVMDAKTAL RMLMAGKQQF DLVITDVRMP DMDGFKLLEL IRLEMDLPVI
101: MLSVDCDKKV VMKGIEHGAS DFMVKPVRTH ELKNIWQHVQ RWRNPKAISH ISDHDSDVQR VQPATAEKSK LPGNKRNVGD DSNKHNESTC VSTTHRKPRV
201: TWTLQLHNKF LEAINQIGLD RAVPKKVLEL MNVDYLSREN IASHLQKYRL HLKKVNSNHS GDAYERWNSS YNMNNKDNFM HNHEHGRWSA SSSDTSSWST
301: NNYGAIGHLA PAMNTQSNFD MGSYLHDGRV PRYVGKQPSD ARRFTGFGDP PVSLYNNIPN EIMLDEFPSF NYSNSYADLM CGKLMETSKG KTPSNRQSSF
401: ANTTVGGGRS LVASQVNFPQ INQLESYAMS SSRLPLQNEK APFISNTTLV GGFTEQMAPF NMASNTSSVG TMLNGSSALD ASRTSTKDNH LVNSERTTSM
501: LHNLQTNDFF SLTQLLDGRD GASILPMQEG TLDQQPLNDQ LNEINAFSVD DIFSNMNLED FTGDDPIVEE A

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.