Factsheet for TraesCS7A01G146400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G049000.1	Wheat	nucleus	91.69	90.22
TraesCS7A01G146500.1	Wheat	nucleus	83.71	84.96
TraesCS7A01G146700.1	Wheat	nucleus	86.16	80.27
HORVU7Hr1G030050.1	Barley	nucleus	80.94	79.39
GSMUA_AchrUn_...	Banana	nucleus	29.15	67.29
TraesCS7A01G539700.1	Wheat	cytosol, nucleus, plastid	10.91	60.36
TraesCS7A01G510400.1	Wheat	cytosol	7.98	58.33
TraesCS6A01G359200.1	Wheat	nucleus	57.0	51.78
Solyc07g005140.2.1	Tomato	nucleus	36.16	33.38
TraesCS6A01G146200.3	Wheat	nucleus	34.53	33.12
PGSC0003DMT400020233	Potato	nucleus	36.65	31.82
Solyc12g010330.1.1	Tomato	nucleus	36.32	31.5
TraesCS7A01G510300.1	Wheat	nucleus	24.27	29.86
PGSC0003DMT400008290	Potato	nucleus	36.16	28.72
TraesCS7A01G502300.1	Wheat	nucleus	24.76	26.81
TraesCS3A01G391600.1	Wheat	nucleus	25.41	26.71
TraesCS3A01G473600.1	Wheat	nucleus	24.59	26.44
TraesCS3A01G361800.1	Wheat	nucleus, plastid	9.61	26.22
TraesCS7A01G511100.1	Wheat	nucleus	24.1	25.92
TraesCS7A01G511300.1	Wheat	nucleus	24.1	25.92
TraesCS4A01G063100.1	Wheat	nucleus	27.2	24.42
TraesCS3A01G473800.1	Wheat	nucleus	20.85	22.7
TraesCS1A01G258400.1	Wheat	nucleus	10.42	20.51
TraesCS3A01G526600.1	Wheat	nucleus	9.45	20.35
TraesCS7A01G539600.1	Wheat	nucleus	5.86	10.65

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072
PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF37
InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver
TIGRFAMs:TIGR01557	EnsemblPlantsGene:TraesCS7A01G146400	EnsemblPlants:TraesCS7A01G146400.1	TIGR:cd00156	SEG:seg	:

Description

No Description!

Coordinates

chr7A:+:98098219..98103085

Molecular Weight (calculated)

67303.2 Da

IEP (calculated)

6.734

GRAVY (calculated)

-0.357

Length

614 amino acids

Sequence
(BLAST)

001: MLLDAMMMEA RKGLMERDQF PAGMRVLAVD DDPVCLKVLE VLLRRCQYHV TTTNQAATAL RLLRENKDMF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI
101: MLSVNGETKT VLKGITHGAC DYLLKPVRIE ELRNVWQHVV RRKFCNREPN NLDFCKEISR DSYHRLGQAT CDRSSDQSNR ASKKRKEPHC EEEDEGEDND
201: DASAASKKPR VVWSVELHRK FVAAVNQLGI DKAVPKRILE LMNVEKLTRE NVASHLQKYR LYLRRLSAVA SQQASVAAAF GGRDPFLHMG AFEGLHSYHQ
301: PFGPSAAPPS FNPHGLLSGA GATTFGLQDL ASPKGIHCAG NNGEVSLQGN KHADLTQGLT ASSFGQPRLQ QEWIHQETND LCSVFSGGAL ANTMRGTFQR
401: ITSSSLPPED LLECTPHIKV GAHPSVGIQN ASSGLLERSQ QGALPVGDGF SVDKLPLHIS FDGAIATKLD ASFVTEEQGM DQKGIFSERM TVGVCPSESL
501: IAASSGRCGA SSSGSTRLLP PHDTDRHSKY LQFGVASNSR HRMDGGMRQD QRLNNGDFSY DGGAIVPEQT DVYDLGISKL QGQGALNSSS CNFDGLLNSI
601: VKVENRHVMT ILPL

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.