Factsheet for HORVU7Hr1G030050.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G049200.1	Wheat	nucleus	89.3	85.08
TraesCS7D01G148200.1	Wheat	nucleus	89.46	84.98
TraesCS7A01G146700.1	Wheat	nucleus	88.98	84.52
TraesCS7D01G148000.1	Wheat	nucleus	78.59	81.86
TraesCS7A01G146400.1	Wheat	nucleus	79.39	80.94
TraesCS7B01G049000.1	Wheat	nucleus	80.35	80.61
TraesCS7A01G146500.1	Wheat	nucleus	77.32	80.0
HORVU7Hr1G030000.4	Barley	nucleus	82.11	69.18
GSMUA_AchrUn_...	Banana	nucleus	25.72	60.53
HORVU6Hr1G085560.5	Barley	nucleus	54.79	50.07
HORVU7Hr1G112860.2	Barley	cytosol	12.78	38.1
HORVU7Hr1G112830.1	Barley	cytosol, nucleus	9.11	33.53
Solyc07g005140.2.1	Tomato	nucleus	35.3	33.23
HORVU6Hr1G028680.1	Barley	nucleus	32.43	32.58
PGSC0003DMT400020233	Potato	nucleus	36.74	32.53
Solyc12g010330.1.1	Tomato	nucleus	36.42	32.2
PGSC0003DMT400008290	Potato	nucleus	35.78	28.98
HORVU7Hr1G114130.2	Barley	nucleus	21.25	27.14
HORVU3Hr1G086000.1	Barley	nucleus	9.27	25.44
HORVU7Hr1G114450.2	Barley	nucleus	22.68	23.87
HORVU7Hr1G118290.2	Barley	nucleus	22.52	23.38
HORVU4Hr1G066480.1	Barley	nucleus	25.08	22.95
HORVU3Hr1G114970.1	Barley	nucleus	9.58	21.9
HORVU7Hr1G112890.1	Barley	nucleus	23.48	21.78
HORVU7Hr1G112840.1	Barley	nucleus	22.68	21.75
HORVU1Hr1G064950.1	Barley	nucleus	10.22	20.98

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	UniProt:A0A287VWB7	InterPro:CheY-like_superfamily
ncoils:Coil	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G030050	EnsemblPlants:HORVU7Hr1G030050.1	InterPro:Homeobox-like_sf	InterPro:IPR001789
InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392
PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF37	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb
SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI000B47A34F
SEG:seg	:	:	:	:	:

Description

Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:A0A287VWB7]

Coordinates

chrchr7H:-:58178807..58182683

Molecular Weight (calculated)

68094.6 Da

IEP (calculated)

6.470

GRAVY (calculated)

-0.348

Length

626 amino acids

Sequence
(BLAST)

001: DDPVCLKVLE VLLRRCQYHV TTTNQAATAL RLLRENKDMF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSVNGETKS VLKGITHGAC DYLLKPVRIE
101: ELRNVWQHVV RRKFSNREPN NHDLCKEISK PPSSDSYYRL GQATCDSHRS SDQSGRPNKK RKELHSEDED EGDDNDDASA SKKPRVVWSV ELHRKFVAAV
201: NQLGIDKAVP KRILELMNVE KLTRENVASH LQQKYRLYLR RLSAVASQQA SIAAAFGGRD PFLHMGAFEG LHSYHQPFAP SASLPSFNPH GLLSGASAAA
301: FGIQDLASPK ASQCSSSNGA GSHCAGDTNK FHIVSLQDNQ QADLSQGLTA SSLVQPQLQQ NWIHQETNDL CSVFSGGALV NTMSGTLQRV TGSSLPPEDL
401: LECTQHIKVG AHPPIGMPTA SSGLLGRSVG VSANLRDSGI SQQGALPVSD GFSVDKLPLH IRFDGAGVTK LDGYVAQEQV MDQKGIFSER MTVSVCPSES
501: LIAASSAKCG ASSSGSTMLL PPHDAERHSR YLQFGVASNP RHRMDGMRQD QRLNNGGFSY DGGVIVPEQA HMYDLEVPKL QGQGGFNSSG CNFDGLLNSI
601: IKVENDEVPF AENDLGCELF PLGACI

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.