Factsheet for HORVU7Hr1G118290.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 1
nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	secretory
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G525900.1	Wheat	nucleus	67.33	70.12
HORVU7Hr1G112860.2	Barley	cytosol	22.06	63.33
HORVU7Hr1G114450.2	Barley	nucleus	52.9	53.61
HORVU7Hr1G114130.2	Barley	nucleus	42.62	52.45
HORVU7Hr1G112830.1	Barley	cytosol, nucleus	14.43	51.18
HORVU7Hr1G112840.1	Barley	nucleus	49.75	45.94
HORVU7Hr1G112890.1	Barley	nucleus	51.24	45.78
KRH16193	Soybean	nucleus	13.27	39.6
KRH33116	Soybean	cytosol	17.58	37.19
HORVU6Hr1G028680.1	Barley	nucleus	29.35	28.41
GSMUA_Achr10P...	Banana	nucleus	19.9	27.65
Solyc07g005140.2.1	Tomato	nucleus	28.69	26.02
PGSC0003DMT400020233	Potato	nucleus	30.35	25.88
CDY02794	Canola	nucleus	20.4	25.79
Solyc12g010330.1.1	Tomato	nucleus	29.52	25.14
KRH03086	Soybean	nucleus	26.04	23.05
HORVU7Hr1G030050.1	Barley	nucleus	23.38	22.52
PGSC0003DMT400008290	Potato	nucleus	28.52	22.25
KRH20086	Soybean	nucleus	24.88	22.06
HORVU6Hr1G085560.5	Barley	nucleus	25.04	22.04
CDY02793	Canola	nucleus	22.39	21.57
Bra020390.1-P	Field mustard	nucleus	22.22	21.51
CDY32725	Canola	nucleus	22.22	21.51
AT5G58080.1	Thale cress	nucleus	22.55	21.42
HORVU3Hr1G086000.1	Barley	nucleus	7.46	19.74
HORVU7Hr1G030000.4	Barley	nucleus	23.38	18.98
HORVU4Hr1G066480.1	Barley	nucleus	21.23	18.71
HORVU3Hr1G114970.1	Barley	nucleus	7.63	16.79
HORVU1Hr1G064950.1	Barley	nucleus	8.13	16.07

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	UniProt:A0A287XYS5	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G118290	EnsemblPlants:HORVU7Hr1G118290.2	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110
PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448
SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI000B480A2A	SEG:seg

Description

Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:A0A287XYS5]

Coordinates

chrchr7H:-:647107810..647111428

Molecular Weight (calculated)

66839.4 Da

IEP (calculated)

6.064

GRAVY (calculated)

-0.439

Length

603 amino acids

Sequence
(BLAST)

001: CSPSPLKSTL FCSTSGEAAI VRVLGLIEVG RSLENMAAMS EKKFPEGLRV LAVDDDCVCL KVLEAILRRC KYNPTMVTDA KTALKMLRAG KQEFDLVITD
101: VRMPDMDGFK LLQLIRLEMD LPVIMLSVDC DKKAVMKGIT HGACDYLLKP VSTNDIKNIW QHVEKRKNLE AISHINNNND HDYDIDDRVQ PGTAATRTDS
201: ENESNEGDGS NENEESTHIS ITQKKTRVVW TIELQNKFLE AINKIGLDKV VPKRILELMN VDYLTRESIA SHLQKYRLQL KKVKSNPSGE AYERRKSSYN
301: NMNNQGSFMH NHEHERWHMS SGLLSPNNFG ATGHLAQLAN THRNLCMGSL IHDGGMLKHV TPQLSVAGRF PGSIDPPANL YNNIASDTTL DEFASYSFCD
401: SYADCMRGKL VETSKGKFSD PSYKSATHAT LPGVLHRDEI QMRSHVNIPR IPRATPSIQM PLQNEMVPPK MVKGASNSTS LEGFSEQMAS FNIAGNTRSV
501: GMMLNENSTP GNGRISMTQA HMVNSGSTIS AVSNLHAENI GAMTHRLDGG DTVSIHPVQE GTVDQYLYND QVNEIDDISL DDFFSDPLNA DFTIADDVMG
601: GEE

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.