Factsheet for HORVU6Hr1G085560.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G342200.1	Wheat	nucleus	88.91	90.22
TraesCS6B01G392000.1	Wheat	nucleus	88.61	90.06
TraesCS6A01G359200.1	Wheat	nucleus	88.76	89.94
Os02t0796500-01	Rice	nucleus	71.39	71.08
GSMUA_AchrUn_...	Banana	nucleus	26.28	67.67
EES07684	Sorghum	nucleus	63.5	64.44
Zm00001d018380_P001	Maize	nucleus	55.04	61.2
HORVU7Hr1G030050.1	Barley	nucleus	50.07	54.79
HORVU7Hr1G030000.4	Barley	nucleus	50.07	46.16
HORVU7Hr1G112860.2	Barley	cytosol	13.72	44.76
HORVU7Hr1G112830.1	Barley	cytosol, nucleus	9.93	40.0
Solyc07g005140.2.1	Tomato	nucleus	35.91	36.99
HORVU6Hr1G028680.1	Barley	nucleus	33.58	36.92
PGSC0003DMT400020233	Potato	nucleus	36.5	35.36
Solyc12g010330.1.1	Tomato	nucleus	35.77	34.6
PGSC0003DMT400008290	Potato	nucleus	36.06	31.95
HORVU7Hr1G114130.2	Barley	nucleus	20.58	28.78
HORVU4Hr1G066480.1	Barley	nucleus	28.03	28.07
HORVU3Hr1G086000.1	Barley	nucleus	8.61	25.88
HORVU7Hr1G118290.2	Barley	nucleus	22.04	25.04
HORVU7Hr1G114450.2	Barley	nucleus	21.46	24.71
HORVU3Hr1G114970.1	Barley	nucleus	9.2	22.99
HORVU7Hr1G112840.1	Barley	nucleus	21.75	22.82
HORVU7Hr1G112890.1	Barley	nucleus	22.34	22.67
HORVU1Hr1G064950.1	Barley	nucleus	10.07	22.62

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU6Hr1G085560	EnsemblPlants:HORVU6Hr1G085560.5	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	UniProt:M0Z328
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110
PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF15	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448
SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI000295EA2E	SEG:seg

Description

Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:M0Z328]

Coordinates

chrchr6H:-:559350007..559355091

Molecular Weight (calculated)

74002.3 Da

IEP (calculated)

6.822

GRAVY (calculated)

-0.322

Length

685 amino acids

Sequence
(BLAST)

001: MMRRDERRGA AAAATCRDQF PVGMRVLAVD DDPVCLKVLE TLLRRCQYHV TATNQAIIAL RMLRENRDMF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI
101: MLSVNGETKT VMKGITHGAC DYLLKPVRIE ELKNIWQHVV RRKFSTRDSL NADMYEECNK PPSSDSDYLY DQVKCGSSVQ SGRPNKKRKE YHSEEEDEDG
201: DSSGQDNDDP SAPKRPRVVW SVELHRKFVT AVNHLGIDKA VPKRILELMN VEKLTRENVA SHLQKYRVYL RRLSAVASQQ AGIVAALGGR DPFLRMDAFE
301: GLQGYQAFTS PAALSTFGAH GLLNSPRNNQ TAVVIQGVAT SRSIPTGSSS CTTNPLIGDA ANYHLSPPGN RHGNLAQGLV TSLGQTQLEQ KWMNEGSGDL
401: SSILSGSSRA NGMPRMLPSV TSSPLLPSDL VECTQAQVAI QPPVTAPSAS LEQLEGAIGA SSGTLVSRVS QQNALSPSGF SANGLLVHGS LNNYGASFSS
501: NGATRLGDAF SASFRQTNDF TVPRGMKVGS SSFGGAIHLS PDTTEQKYLS FGSSDSLLDP KLVWSSSQLP SNIGAHHFMS QRSNNCSIGS SHGARMFGQT
601: SAGASTAVPQ AKFDILFSGD ASMARNASES SARRSESSAQ RLQSELSSST CSFDGLLNSM IKVEKDDVAF SDDLGCDFYS FGACI

Best Arabidopsis Sequence Match ( AT4G31920.1 )
(BLAST)

001: MTMEQEIEVL DQFPVGMRVL AVDDDQTCLR ILQTLLQRCQ YHVTTTNQAQ TALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVKH GACDYLLKPV RIEELKNIWQ HVVRKSKLKK NKSNVSNGSG NCDKANRKRK EQYEEEEEEE RGNDNDDPTA QKKPRVLWTH ELHNKFLAAV
201: DHLGVERAVP KKILDLMNVD KLTRENVASH LQKFRVALKK VSDDAIQQAN RAAIDSHFMQ MNSQKGLGGF YHHHRGIPVG SGQFHGGTTM MRHYSSNRNL
301: GRLNSLGAGM FQPVSSSFPR NHNDGGNILQ GLPLEELQIN NNINRAFPSF TSQQNSPMVA PSNLLLLEGN PQSSSLPSNP GFSPHFEISK RLEHWSNAAL
401: STNIPQSDVH SKPDTLEWNA FCDSASPLVN PNLDTNPASL CRNTGFGSTN AAQTDFFYPL QMNQQPANNS GPVTEAQLFR SSNPNEGLLM GQQKLQSGLM
501: ASDAGSLDDI VNSLMTQEQS QSDFSEGDWD LDGLAHSEHA YEKLHFPFSL SA

Arabidopsis Description

ARR10Two-component response regulator ARR10 [Source:UniProtKB/Swiss-Prot;Acc:O49397]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.