Factsheet for Os02t0796500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G342200.1	Wheat	nucleus	73.98	75.41
TraesCS6B01G392000.1	Wheat	nucleus	73.69	75.22
TraesCS6A01G359200.1	Wheat	nucleus	73.69	75.0
HORVU6Hr1G085560.5	Barley	nucleus	71.08	71.39
EES07684	Sorghum	nucleus	69.77	71.11
GSMUA_AchrUn_...	Banana	nucleus	26.89	69.55
Zm00001d018380_P001	Maize	nucleus	60.76	67.86
Os06t0183100-01	Rice	nucleus	61.19	60.49
Solyc07g005140.2.1	Tomato	nucleus	37.94	39.25
Os02t0182100-01	Rice	nucleus	35.61	39.14
PGSC0003DMT400020233	Potato	nucleus	37.79	36.78
Solyc12g010330.1.1	Tomato	nucleus	37.35	36.3
PGSC0003DMT400008290	Potato	nucleus	38.66	34.41
Os03t0224200-01	Rice	nucleus	28.78	28.65
Os01t0904700-01	Rice	nucleus	23.69	28.01
Os01t0844900-01	Rice	nucleus	8.28	26.03
Os01t0971800-00	Rice	nucleus	8.87	25.63
Os10t0463400-01	Rice	nucleus	12.65	25.51
Os06t0647200-02	Rice	nucleus	25.44	25.36
Os05t0412000-00	Rice	nucleus	10.32	17.19

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EntrezGene:4331008	EMBL:AK099581
EMBL:AK120648	ProteinID:BAD19083.1	ProteinID:BAD19284.1	ProteinID:BAF10303.1	ProteinID:BAS81367.1	InterPro:CheY-like_superfamily
ProteinID:EEE57977.1	ProteinID:FAA00256.1	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009736	GO:GO:0009987	InterPro:Homeobox-like_sf
InterPro:IPR001789	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	EnsemblPlantsGene:Os02g0796500	EnsemblPlants:Os02t0796500-01
PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874
PANTHER:PTHR43874:SF15	UniProt:Q6K8X6	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0000375750	RefSeq:XP_015625496.1	SEG:seg

Description

B-TYPE RESPONSE REGULATOR 3B-type response regulator, Cytokinin signaling (Os02t0796500-01);B-type response regulator, Cytokinin signaling (Os02t0796500-02);B-type response regulator, Cytokinin signaling (Os02t0796500-03)

Coordinates

chr2:-:33859978..33864842

Molecular Weight (calculated)

74388.2 Da

IEP (calculated)

6.918

GRAVY (calculated)

-0.323

Length

688 amino acids

Sequence
(BLAST)

001: MRAAEERKGV VPAARRRDQF PVGMRVLAVD DDPVCLKVLE TLLLRCQYHV TTTNQAAIAL KMLRENRDMF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI
101: MLSVNGETKT VLKGITHGAC DYLLKPVRIE ELRNIWQHVI RRKFSTRDRA NLDFYEECNK PPNADSDHVH GHVTCGSPDQ SGRPSKKRKE YCSEEEDEGE
201: VNTQDIDDPS APKKPRVVWS VELHRKFVAA VNQLGIDKAV PKRILELMNV EKLTRENVAS HLQKYRLYLK RLSAVASQQV SIVAALGGRD PFLHMGGFEG
301: LQGYQAFTSS AALSSFTPHG LLNSPRNNPA ALGTQGVPAS KSIQTMSGSH TLSHSINDAN KYHLSLPGNQ KGNLGQGLAT SLGQTQMQQK WIHEETDDLS
401: TILSGNGLSN GMSGTLQSVT SSPLLPQELA ECTQAKIVSQ PSIRTSSVSS EHIEGAVGVS SGLLESRVSQ QSTIPLSGFS ANGLLIHGSF NNTCANKLGG
501: TSSSCAPARS SNDLMVARDT KGGASSFGGA MLLPPDTEQK YLNFGGGNGL KQKFDDRTAD SLFDLKFVWS SVPSSQLASN IGAHHAMSQR WNNSSSNSSN
601: IGARMIGQAT SSGSTVIPQM KTDFLVSGDM AMPKNASDLS IPKLQSELSS SSCSFDGLLN SIVKVEKDDV TFSDDLGCGD FYSLGACI

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.