Factsheet for GSMUA_AchrUn_randomP18820_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P16510_001	Banana	cytosol, nucleus, plastid	40.23	49.54
GSMUA_Achr3P14630_001	Banana	cytosol	49.62	36.16
GSMUA_Achr5P13050_001	Banana	cytosol	27.44	31.88
TraesCS7D01G148000.1	Wheat	nucleus	67.67	29.95
TraesCS7A01G146500.1	Wheat	nucleus	66.54	29.26
TraesCS7A01G146400.1	Wheat	nucleus	67.29	29.15
TraesCS7B01G049000.1	Wheat	nucleus	66.54	28.37
GSMUA_Achr2P05130_001	Banana	nucleus	68.42	28.26
GSMUA_Achr10P...	Banana	nucleus	69.17	28.18
GSMUA_Achr3P13400_001	Banana	nucleus	65.41	27.71
GSMUA_Achr10P...	Banana	nucleus	45.11	27.65
TraesCS7B01G049200.1	Wheat	nucleus	67.67	27.4
Zm00001d045112_P001	Maize	nucleus	68.8	27.35
TraesCS7D01G148200.1	Wheat	nucleus	67.29	27.16
Os06t0183100-01	Rice	nucleus	71.05	27.16
EES07684	Sorghum	nucleus	68.8	27.11
KXG19480	Sorghum	nucleus	68.05	26.93
GSMUA_Achr11P...	Banana	nucleus	63.91	26.9
Os02t0796500-01	Rice	nucleus	69.55	26.89
TraesCS7A01G146700.1	Wheat	nucleus	66.54	26.86
TraesCS6D01G342200.1	Wheat	nucleus	67.67	26.67
TraesCS6B01G392000.1	Wheat	nucleus	67.29	26.56
TraesCS6A01G359200.1	Wheat	nucleus	67.29	26.48
HORVU6Hr1G085560.5	Barley	nucleus	67.67	26.28
HORVU7Hr1G030050.1	Barley	nucleus	60.53	25.72
Solyc07g005140.2.1	Tomato	nucleus	63.91	25.56
HORVU7Hr1G030000.4	Barley	nucleus	68.42	24.5
Zm00001d018380_P001	Maize	nucleus	56.02	24.19
Solyc12g010330.1.1	Tomato	nucleus	63.16	23.73
GSMUA_Achr8P32070_001	Banana	nucleus	48.12	23.49
PGSC0003DMT400020233	Potato	nucleus	62.41	23.48
PGSC0003DMT400008290	Potato	nucleus	63.91	21.99
GSMUA_Achr8P30850_001	Banana	nucleus	54.14	20.0
GSMUA_Achr1P22230_001	Banana	nucleus	54.14	19.92
GSMUA_Achr11P...	Banana	nucleus	47.37	19.12
GSMUA_Achr9P16610_001	Banana	nucleus	50.38	18.53
GSMUA_Achr5P07060_001	Banana	nucleus	14.66	17.03
GSMUA_Achr10P...	Banana	nucleus	16.17	15.41
GSMUA_AchrUn_...	Banana	nucleus	16.92	14.75
GSMUA_Achr10P...	Banana	nucleus	12.03	13.33
GSMUA_Achr11P...	Banana	nucleus	13.91	12.21
GSMUA_Achr8P05880_001	Banana	nucleus	14.29	12.06
GSMUA_Achr2P01920_001	Banana	nucleus, plastid	12.78	11.72
GSMUA_Achr5P27500_001	Banana	nucleus	11.65	10.92

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSMUA_AchrUn_randomG18820_001	EnsemblPlants:GSMUA_AchrUn_randomP18820_001	EnsemblPlants:GSMUA_AchrUn_randomT18820_001	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930
UniProt:M0UAE1	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PIRSF:PIRSF036392	PFscan:PS50110
PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	InterPro:Response_reg_B-typ_pln	SMART:SM00448	SUPFAM:SSF46689
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI00029657F4	SEG:seg	:

Description

Two-component response regulator ARR12 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG18820_001]

Coordinates

chrchrUn_random:+:90437546..90439116

Molecular Weight (calculated)

30491.5 Da

IEP (calculated)

6.190

GRAVY (calculated)

-0.615

Length

266 amino acids

Sequence
(BLAST)

001: MTVEERKGHL MREEGGQNDR FPVGMRVLAV DDDPTCLRVL EALLLRCRYH VTTTNQATVA LKLLRENRDK FDLVISDVHM PDMDGFKLLE LVGLEMDLPV
101: IMLSVNGETK TVMKGIAHGA CDYLLKPVRI EELKNIWQHV VRRRKFSHKD YSNFDNGEES ERHQIVSSEG GQDLNVSGSA NQNGKLSRKR KDQNEEDEDD
201: CEENVHENED LTTQKKPRVV WSIDLHRKFV AAVNQLGIDK AVPKRILELM NVERLTRENV ASHLQA

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.