Factsheet for GSMUA_Achr11P05340_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P16610_001	Banana	nucleus	54.93	50.07
GSMUA_AchrUn_...	Banana	nucleus	19.12	47.37
GSMUA_Achr3P14630_001	Banana	cytosol	23.98	43.29
GSMUA_Achr5P16510_001	Banana	cytosol, nucleus, plastid	12.29	37.5
GSMUA_Achr5P13050_001	Banana	cytosol	10.93	31.44
GSMUA_Achr10P...	Banana	nucleus	20.18	30.65
GSMUA_Achr8P32070_001	Banana	nucleus	25.34	30.64
GSMUA_Achr1P22230_001	Banana	nucleus	33.08	30.15
GSMUA_Achr10P...	Banana	nucleus	28.38	28.64
GSMUA_Achr3P13400_001	Banana	nucleus	26.56	27.87
GSMUA_Achr8P30850_001	Banana	nucleus	30.35	27.78
GSMUA_Achr11P...	Banana	nucleus	26.1	27.22
GSMUA_Achr2P05130_001	Banana	nucleus	26.4	27.02
GSMUA_Achr5P07060_001	Banana	nucleus	8.95	25.76
GSMUA_Achr10P...	Banana	nucleus	9.1	25.0
GSMUA_Achr10P...	Banana	nucleus	9.41	22.22
GSMUA_Achr2P01920_001	Banana	nucleus, plastid	9.26	21.03
GSMUA_Achr8P05880_001	Banana	nucleus	9.86	20.63
GSMUA_Achr11P...	Banana	nucleus	9.1	19.8
GSMUA_Achr5P27500_001	Banana	nucleus	8.5	19.72
GSMUA_AchrUn_...	Banana	nucleus	8.8	19.02

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	ncoils:Coil
GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr11G05340_001	EnsemblPlants:GSMUA_Achr11P05340_001	EnsemblPlants:GSMUA_Achr11T05340_001	InterPro:Homeobox-like_sf	InterPro:IPR001789
UniProt:M0RPL4	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110
PANTHER:PTHR43874	PANTHER:PTHR43874:SF23	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI00029490E3	SEG:seg	:

Description

Putative Two-component response regulator ARR2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G05340_001]

Coordinates

chr11:+:3962656..3969267

Molecular Weight (calculated)

73603.2 Da

IEP (calculated)

5.820

GRAVY (calculated)

-0.456

Length

659 amino acids

Sequence
(BLAST)

001: MPTEFPAGLR VLLVDDDATC LKIIEMMLRK CHYDVTTCSC AVTALSMLRE RKGWFDLVLS DVYMPDMDGF KLLEHIGLEM DLPVIMMSAD DHKDVVMKGV
101: THGAVDYLIK PVRIEPLKNI WQHVVRKKRF ELKELEHSGS FEENQRESER HKRAMEECDN ATSGCGENLK NIKRKKEGKE EDEQDVDEQA DPSQTKKPRV
201: VWSSELHQQF VTAVNQLGID KLCILSHQTI DFIFIILAKI FPKKILELMK VAGLTRENVA SHLQKYRLYL RRLSVPQHQD RLDGPFTSAQ DATFRSVGTV
301: DGFDLQALAV SGQLLPQNLS ALSSGSRRVT NTGLRMPVFD QMGFLNSGNA SSTRSASVQQ MNRGLGYFSG FSNSIESRQL GQSHQLVEPY GNMCSQPFPR
401: GQIFNGIGGH DSRLSSKFGY QMSPNDISSH ISGRTANIAQ TPMPGNHISA SYSSVPEALY ANNIHDSCLT ESAASHYPLA SSIGDTPTTG NVEALSNTSS
501: LKGVTDLSNC NIYSELRQNK TQDWKLKTVN ISYQSGQNLA PKQNNADFGS SLVAHQDSIA TVQDESSRNT CTVRKEILSV TTEIENEKIE CVAQRNSTIL
601: VENSIRLKSE SMPDIKHQEV LYDNIISNDL MDVGKQQQEG IEQDDPEFFD AYSLENIPM

Best Arabidopsis Sequence Match ( AT3G16857.2 )
(BLAST)

001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV

Arabidopsis Description

ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.