Factsheet for GSMUA_Achr2P01920_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P27500_001	Banana	nucleus	70.34	71.83
GSMUA_Achr8P05880_001	Banana	nucleus	77.59	71.43
GSMUA_Achr11P...	Banana	nucleus	71.03	67.99
GSMUA_Achr10P...	Banana	nucleus	43.1	52.08
GSMUA_Achr5P07060_001	Banana	nucleus	28.97	36.68
GSMUA_Achr10P...	Banana	nucleus	31.72	32.97
GSMUA_AchrUn_...	Banana	nucleus	27.59	26.23
GSMUA_Achr3P14630_001	Banana	cytosol	16.55	13.15
GSMUA_Achr10P...	Banana	nucleus	19.31	12.9
GSMUA_AchrUn_...	Banana	nucleus	11.72	12.78
GSMUA_Achr8P32070_001	Banana	nucleus	18.97	10.09
GSMUA_Achr11P...	Banana	nucleus	21.03	9.26
GSMUA_Achr10P...	Banana	nucleus	20.69	9.19
GSMUA_Achr2P05130_001	Banana	nucleus	19.66	8.85
GSMUA_Achr3P13400_001	Banana	nucleus	18.97	8.76
GSMUA_Achr11P...	Banana	nucleus	18.62	8.54
GSMUA_Achr8P30850_001	Banana	nucleus	20.69	8.33
GSMUA_Achr1P22230_001	Banana	nucleus	20.69	8.3
GSMUA_Achr5P16510_001	Banana	cytosol, nucleus, plastid	5.86	7.87
GSMUA_Achr5P13050_001	Banana	cytosol	6.21	7.86
GSMUA_Achr9P16610_001	Banana	nucleus	17.59	7.05

Protein Annotations

Gene3D:1.10.10.60	MapMan:35.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr2G01920_001
EnsemblPlants:GSMUA_Achr2P01920_001	EnsemblPlants:GSMUA_Achr2T01920_001	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:M0S4D3	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR31442	PANTHER:PTHR31442:SF1	InterPro:SANT/Myb
SUPFAM:SSF46689	TIGRFAMs:TIGR01557	UniParc:UPI000294A8A0	SEG:seg	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G01920_001]

Coordinates

chr2:-:7789776..7790917

Molecular Weight (calculated)

31458.5 Da

IEP (calculated)

10.926

GRAVY (calculated)

-0.676

Length

290 amino acids

Sequence
(BLAST)

001: MPFVADPHHP QPRRRLQHTR RRRPRRPTEN PRTSPLPPTP RPPGPPSPTP PTPSDLEPSD LNSDSAAAPG GDEPARTLKR PRLVWTPQLH KRFVDAVAHL
101: GIKNAVPKTI MQLMSVDGLT RENVASHLQK YRLYLKRMQG LATSGGGAGS GPISAADAAT DQLFASAPVP HHFLSRGPVA GPEPFPPYVP MPALQHHQQI
201: AAAMQQQQYY HQRHLGHFGS PTGGRGFDQG FLNRAVPQSG MHQMLAPAPG MGLMQLSSPR AASFVDDSEP AGREGSGERK VLTLFPTGED

Best Arabidopsis Sequence Match ( AT3G10760.1 )
(BLAST)

001: MREDDSDWFA RWEEELPSPE ELMPISQSLI SPDLALAFDI RTPNHGNGNS NQPHHHHHHQ TTPPTPSQLQ LPSSQANSSA EFAADSADLG SGGAAGDEPA
101: RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSSGG GAGSDPATDR LFASSPVPAH FLHPNRVPSS
201: DHFMPSFVPI ATLQQQQQMA AAAAAAAAAN PHLQPPQFHR QIAAAHFGSP TNGGFSSPTS NGQFGSPTSN GFGSPTTNGK FDPSFLAVRQ TQQQPIQRMS
301: TPSLHSPVSN YVEDLESANA NGGRTVLTLF PTRDD

Arabidopsis Description

Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SG82]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.