Factsheet for GSMUA_Achr8P32070_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P14630_001	Banana	cytosol	44.59	66.58
Os01t0904700-01	Rice	nucleus	53.21	49.83
GSMUA_AchrUn_...	Banana	nucleus	23.49	48.12
TraesCS3B01G423600.1	Wheat	nucleus	51.01	47.6
TraesCS3A01G391600.1	Wheat	nucleus	50.64	47.26
KRG97483	Soybean	nucleus	39.08	46.81
EES04061	Sorghum	nucleus	49.54	46.63
TraesCS3D01G384500.2	Wheat	nucleus	51.19	44.78
Zm00001d012128_P001	Maize	nucleus	48.62	43.95
Zm00001d042463_P001	Maize	nucleus	49.54	43.9
CDY01838	Canola	nucleus	39.63	43.2
Bra004245.1-P	Field mustard	nucleus	40.0	42.58
CDX96070	Canola	nucleus	39.63	42.11
Bra004076.1-P	Field mustard	nucleus	39.08	41.85
CDY07410	Canola	nucleus	39.08	41.85
CDY28869	Canola	nucleus	38.9	41.81
AT1G67710.1	Thale cress	nucleus	39.82	41.65
VIT_01s0010g02230.t01	Wine grape	nucleus	44.59	40.91
VIT_17s0000g10100.t01	Wine grape	nucleus	42.39	40.53
PGSC0003DMT400031260	Potato	nucleus	42.94	40.34
Solyc05g014260.2.1	Tomato	nucleus	42.39	39.76
KRH31403	Soybean	nucleus	43.67	39.4
VIT_17s0000g10110.t01	Wine grape	nucleus	30.83	37.17
KRH58726	Soybean	endoplasmic reticulum, extracellular	43.12	37.01
GSMUA_Achr5P16510_001	Banana	cytosol, nucleus, plastid	14.5	36.57
KRH42619	Soybean	nucleus	32.84	35.1
GSMUA_Achr5P13050_001	Banana	cytosol	13.76	32.75
GSMUA_Achr10P...	Banana	nucleus	23.85	29.95
GSMUA_Achr11P...	Banana	nucleus	30.64	25.34
GSMUA_Achr3P13400_001	Banana	nucleus	28.44	24.68
GSMUA_Achr2P05130_001	Banana	nucleus	28.81	24.38
GSMUA_Achr11P...	Banana	nucleus	28.26	24.37
GSMUA_Achr10P...	Banana	nucleus	28.07	23.43
GSMUA_Achr9P16610_001	Banana	nucleus	30.28	22.82
GSMUA_Achr5P07060_001	Banana	nucleus	9.54	22.71
GSMUA_Achr1P22230_001	Banana	nucleus	28.81	21.72
GSMUA_Achr8P30850_001	Banana	nucleus	28.07	21.25
GSMUA_Achr10P...	Banana	nucleus	9.17	20.83
GSMUA_Achr11P...	Banana	nucleus	11.19	20.13
GSMUA_Achr10P...	Banana	nucleus	10.28	20.07
GSMUA_Achr2P01920_001	Banana	nucleus, plastid	10.09	18.97
GSMUA_Achr5P27500_001	Banana	nucleus	9.72	18.66
GSMUA_Achr8P05880_001	Banana	nucleus	10.64	18.41
GSMUA_AchrUn_...	Banana	nucleus	10.09	18.03

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G32070_001
EnsemblPlants:GSMUA_Achr8P32070_001	EnsemblPlants:GSMUA_Achr8T32070_001	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	UniProt:M0TVF9
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PFscan:PS50110	PFscan:PS51294
PANTHER:PTHR43874	PANTHER:PTHR43874:SF27	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0002962195	SEG:seg	:	:

Description

two-component response regulator, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G32070_001]

Coordinates

chr8:-:33590839..33595635

Molecular Weight (calculated)

61599.9 Da

IEP (calculated)

5.497

GRAVY (calculated)

-0.392

Length

545 amino acids

Sequence
(BLAST)

001: MGNPLPSSRA AEAFPAGLRV LIVDDDPTWL KILEKMLRKC SYQVTTCSLA TDALHILRER KARFDIVISD VNMPDMDGFK LLEHVGLEMD LPVIMMSIDG
101: ETSRVMKGVQ HGACDYLLKP VRMKELRNIW QHVYRKKMQE HLIDETEMSS MRKRKDVDNK EFVDQELNDP STVKKARVVW SVDLHQKFVN AVDQIGFDKV
201: GPKKILDLMS VPGLTRENVA SHLQKYRLYL SRLQKQNGGT CGGNMQSDHI NKTIKGKFGL KSSTNVQQDW ELTKYACTTE NFQTHGIVAN AAHVSEMNRV
301: APAQVIASKK ALVNDAQLGL FLSFKGMLPS IREKACKPLH DERPVMQLMQ YPEQENYSVL EGYSCLANPD RDHEPCFDHF PSSQPLITSA TCTNGKDMKD
401: LYEMKPLQPA MPPMACTIDS VSIQVKHGLV NLQDTGAICK LEGSPSIEDC YLDETCNQGC FPLTYEVSLK SKSDSDSMLE DLHLYSVQKL SYLENVSCTG
501: TEIYQYIDSV PITEVQRINL CEDSEPSGEY LYDPVDYSID EYLFS

Best Arabidopsis Sequence Match ( AT1G67710.1 )
(BLAST)

001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S

Arabidopsis Description

ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.