Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P01920_001 | Banana | nucleus, plastid | 71.83 | 70.34 |
| GSMUA_Achr11P... | Banana | nucleus | 74.65 | 69.97 |
| GSMUA_Achr8P05880_001 | Banana | nucleus | 77.46 | 69.84 |
| GSMUA_Achr10P... | Banana | nucleus | 48.94 | 57.92 |
| VIT_08s0040g00900.t01 | Wine grape | nucleus | 57.39 | 53.27 |
| Solyc10g080960.1.1 | Tomato | nucleus | 49.65 | 53.01 |
| Bra029866.1-P | Field mustard | nucleus | 52.11 | 51.75 |
| PGSC0003DMT400072213 | Potato | nucleus | 47.54 | 50.75 |
| KRH71692 | Soybean | nucleus | 46.13 | 50.38 |
| Bra009087.1-P | Field mustard | nucleus | 46.83 | 49.81 |
| Bra005837.1-P | Field mustard | nucleus | 42.96 | 48.61 |
| Solyc10g078310.1.1 | Tomato | nucleus | 49.3 | 48.28 |
| PGSC0003DMT400018485 | Potato | nucleus | 49.3 | 48.28 |
| HORVU1Hr1G064950.1 | Barley | nucleus | 51.41 | 47.87 |
| Bra004593.1-P | Field mustard | nucleus | 41.55 | 47.77 |
| Zm00001d038191_P001 | Maize | nucleus | 52.11 | 47.44 |
| KRG95053 | Soybean | nucleus | 52.11 | 47.44 |
| AT5G05090.1 | Thale cress | nucleus | 44.37 | 47.37 |
| TraesCS1B01G268900.1 | Wheat | nucleus | 51.06 | 47.08 |
| TraesCS1D01G257700.1 | Wheat | nucleus | 51.06 | 46.93 |
| CDY36273 | Canola | mitochondrion | 39.44 | 46.86 |
| Zm00001d010280_P001 | Maize | nucleus | 48.94 | 46.49 |
| TraesCS1A01G258400.1 | Wheat | nucleus | 50.7 | 46.15 |
| AT2G40970.1 | Thale cress | nucleus | 40.14 | 45.97 |
| Bra034144.1-P | Field mustard | nucleus | 52.46 | 45.85 |
| AT3G10760.1 | Thale cress | nucleus | 52.82 | 44.78 |
| KRH66705 | Soybean | nucleus | 50.7 | 44.72 |
| GSMUA_Achr5P07060_001 | Banana | nucleus | 33.45 | 41.48 |
| Os05t0412000-00 | Rice | nucleus | 52.11 | 35.84 |
| GSMUA_Achr10P... | Banana | nucleus | 34.51 | 35.13 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.58 | 27.54 |
| GSMUA_Achr3P14630_001 | Banana | cytosol | 16.2 | 12.6 |
| GSMUA_Achr10P... | Banana | nucleus | 18.31 | 11.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 10.92 | 11.65 |
| GSMUA_Achr8P32070_001 | Banana | nucleus | 18.66 | 9.72 |
| GSMUA_Achr3P13400_001 | Banana | nucleus | 19.37 | 8.76 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 7.04 | 8.73 |
| GSMUA_Achr11P... | Banana | nucleus | 19.01 | 8.54 |
| GSMUA_Achr11P... | Banana | nucleus | 19.72 | 8.5 |
| GSMUA_Achr10P... | Banana | nucleus | 19.01 | 8.27 |
| GSMUA_Achr1P22230_001 | Banana | nucleus | 19.72 | 7.75 |
| GSMUA_Achr8P30850_001 | Banana | nucleus | 19.37 | 7.64 |
| GSMUA_Achr2P05130_001 | Banana | nucleus | 17.25 | 7.61 |
| GSMUA_Achr5P16510_001 | Banana | cytosol, nucleus, plastid | 5.63 | 7.41 |
| GSMUA_Achr9P16610_001 | Banana | nucleus | 18.31 | 7.19 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr5G27500_001 |
| EnsemblPlants:GSMUA_Achr5P27500_001 | EnsemblPlants:GSMUA_Achr5T27500_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0T275 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31442 | PANTHER:PTHR31442:SF1 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000296ABE5 | SEG:seg | : | : |
Description
homeodomain-related, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G27500_001]
Coordinates
chr5:-:27995572..27997164
Molecular Weight (calculated)
30240.0 Da
IEP (calculated)
8.510
GRAVY (calculated)
-0.343
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLSQTLITP ELALAFDITA AGAANGNLNP ALFPQPPAPP QPAACSHPAP PLSSDFESSA SAAAGSGGGD EPARTLKRPR LVWTPQLHKR FVDAVAHLGI
101: KNAVPKTIMQ LMSVDGLTRE NVASHLQKYR LYLKRMQGLS TSGGGPISAA DAATDQLFAS APVPHQFLSR GPAAGPEPFL PYVPTAALQH QQQITAAMQQ
201: QQHQQQYYHQ RHLGHFGSST GGFDHGFLNR GMPQPAMHQM VGPAPGTGFL QLTPPPAALS VDDLEPARRE DGGERKVLTL FPDR
101: KNAVPKTIMQ LMSVDGLTRE NVASHLQKYR LYLKRMQGLS TSGGGPISAA DAATDQLFAS APVPHQFLSR GPAAGPEPFL PYVPTAALQH QQQITAAMQQ
201: QQHQQQYYHQ RHLGHFGSST GGFDHGFLNR GMPQPAMHQM VGPAPGTGFL QLTPPPAALS VDDLEPARRE DGGERKVLTL FPDR
001: MREDDSDWFA RWEEELPSPE ELMPISQSLI SPDLALAFDI RTPNHGNGNS NQPHHHHHHQ TTPPTPSQLQ LPSSQANSSA EFAADSADLG SGGAAGDEPA
101: RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSSGG GAGSDPATDR LFASSPVPAH FLHPNRVPSS
201: DHFMPSFVPI ATLQQQQQMA AAAAAAAAAN PHLQPPQFHR QIAAAHFGSP TNGGFSSPTS NGQFGSPTSN GFGSPTTNGK FDPSFLAVRQ TQQQPIQRMS
301: TPSLHSPVSN YVEDLESANA NGGRTVLTLF PTRDD
101: RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSSGG GAGSDPATDR LFASSPVPAH FLHPNRVPSS
201: DHFMPSFVPI ATLQQQQQMA AAAAAAAAAN PHLQPPQFHR QIAAAHFGSP TNGGFSSPTS NGQFGSPTSN GFGSPTTNGK FDPSFLAVRQ TQQQPIQRMS
301: TPSLHSPVSN YVEDLESANA NGGRTVLTLF PTRDD
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SG82]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.