Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038191_P001 | Maize | nucleus | 86.62 | 83.01 |
| HORVU1Hr1G064950.1 | Barley | nucleus | 74.92 | 73.44 |
| TraesCS1D01G257700.1 | Wheat | nucleus | 75.25 | 72.82 |
| TraesCS1B01G268900.1 | Wheat | nucleus | 74.92 | 72.73 |
| TraesCS1A01G258400.1 | Wheat | nucleus | 74.92 | 71.79 |
| Os05t0412000-00 | Rice | nucleus | 76.25 | 55.21 |
| GSMUA_Achr11P... | Banana | nucleus | 54.18 | 53.47 |
| GSMUA_Achr8P05880_001 | Banana | nucleus | 56.19 | 53.33 |
| Solyc10g080960.1.1 | Tomato | nucleus | 46.49 | 52.26 |
| PGSC0003DMT400072213 | Potato | nucleus | 45.48 | 51.13 |
| Bra009087.1-P | Field mustard | nucleus | 45.15 | 50.56 |
| Bra005837.1-P | Field mustard | nucleus | 41.81 | 49.8 |
| Bra004593.1-P | Field mustard | nucleus | 41.14 | 49.8 |
| Solyc10g078310.1.1 | Tomato | nucleus | 48.16 | 49.66 |
| VIT_08s0040g00900.t01 | Wine grape | nucleus | 50.5 | 49.35 |
| PGSC0003DMT400018485 | Potato | nucleus | 47.83 | 49.31 |
| GSMUA_Achr5P27500_001 | Banana | nucleus | 46.49 | 48.94 |
| AT2G40970.1 | Thale cress | nucleus | 40.13 | 48.39 |
| AT5G05090.1 | Thale cress | nucleus | 42.81 | 48.12 |
| KRH71692 | Soybean | nucleus | 41.81 | 48.08 |
| Bra029866.1-P | Field mustard | nucleus | 45.82 | 47.9 |
| KRG95053 | Soybean | nucleus | 49.16 | 47.12 |
| KRH66705 | Soybean | nucleus | 47.83 | 44.41 |
| Bra034144.1-P | Field mustard | nucleus | 46.49 | 42.77 |
| AT3G10760.1 | Thale cress | nucleus | 47.49 | 42.39 |
| CDY36273 | Canola | mitochondrion | 30.77 | 38.49 |
| Zm00001d011785_P001 | Maize | nucleus | 27.76 | 37.9 |
| Zm00001d041960_P001 | Maize | nucleus | 30.1 | 34.88 |
| Zm00001d042892_P001 | Maize | nucleus | 24.41 | 24.01 |
| Zm00001d032784_P001 | Maize | nucleus | 15.72 | 13.95 |
| Zm00001d036802_P001 | Maize | nucleus | 16.05 | 12.37 |
| Zm00001d045112_P001 | Maize | nucleus | 24.41 | 10.91 |
| Zm00001d015521_P001 | Maize | nucleus | 22.41 | 10.62 |
| Zm00001d012128_P001 | Maize | nucleus | 20.74 | 10.28 |
| Zm00001d048046_P001 | Maize | nucleus | 23.41 | 10.2 |
| Zm00001d028265_P002 | Maize | nucleus | 23.75 | 10.14 |
| Zm00001d042463_P001 | Maize | nucleus | 20.74 | 10.08 |
| Zm00001d046755_P001 | Maize | nucleus | 19.4 | 8.64 |
| Zm00001d018380_P001 | Maize | nucleus | 13.71 | 6.66 |
| Zm00001d036803_P001 | Maize | cytosol | 2.34 | 6.6 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:107548110 | MapMan:35.1 | ProteinID:AQK93776.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7UVN8 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31442 | PANTHER:PTHR31442:SF1 | InterPro:SANT/Myb | SUPFAM:SSF46689 |
| TIGRFAMs:TIGR01557 | UniParc:UPI0002216F3F | EnsemblPlantsGene:Zm00001d010280 | EnsemblPlants:Zm00001d010280_P001 | EnsemblPlants:Zm00001d010280_T001 | SEG:seg |
Description
G2-like-transcription factor 3Putative MYB DNA-binding domain superfamily protein
Coordinates
chr8:-:107186649..107187548
Molecular Weight (calculated)
30830.4 Da
IEP (calculated)
7.415
GRAVY (calculated)
-0.404
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MREEEEPSWF ARGEEQEQQL PRPDELMPLT QTLITPDLAV AFDITTHGAG GAGPVPDING GGASSAAGSS GGGGGGGGDE PARTLKRPRL VWTPQLHKRF
101: VDAVAQLGIK NAVPKTIMQL MSVDGLTREN VASHLQKYRL YLKRMQGLGG GGGGGSHSSG SGSATDAATE HLFATGPVPF LPPAHRAPAA DTYPPFSPMG
201: SGAAHHHHRA PQIGHFHHPA ARPLAHYAAA AGPGFDHGFL SRVAPPGMHH HRMASAAAGM GMGMIAPSSF ADEMDRGAGG SGGGGGRREL TLFPTSGDH
101: VDAVAQLGIK NAVPKTIMQL MSVDGLTREN VASHLQKYRL YLKRMQGLGG GGGGGSHSSG SGSATDAATE HLFATGPVPF LPPAHRAPAA DTYPPFSPMG
201: SGAAHHHHRA PQIGHFHHPA ARPLAHYAAA AGPGFDHGFL SRVAPPGMHH HRMASAAAGM GMGMIAPSSF ADEMDRGAGG SGGGGGRREL TLFPTSGDH
001: MREDDSDWFA RWEEELPSPE ELMPISQSLI SPDLALAFDI RTPNHGNGNS NQPHHHHHHQ TTPPTPSQLQ LPSSQANSSA EFAADSADLG SGGAAGDEPA
101: RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSSGG GAGSDPATDR LFASSPVPAH FLHPNRVPSS
201: DHFMPSFVPI ATLQQQQQMA AAAAAAAAAN PHLQPPQFHR QIAAAHFGSP TNGGFSSPTS NGQFGSPTSN GFGSPTTNGK FDPSFLAVRQ TQQQPIQRMS
301: TPSLHSPVSN YVEDLESANA NGGRTVLTLF PTRDD
101: RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSSGG GAGSDPATDR LFASSPVPAH FLHPNRVPSS
201: DHFMPSFVPI ATLQQQQQMA AAAAAAAAAN PHLQPPQFHR QIAAAHFGSP TNGGFSSPTS NGQFGSPTSN GFGSPTTNGK FDPSFLAVRQ TQQQPIQRMS
301: TPSLHSPVSN YVEDLESANA NGGRTVLTLF PTRDD
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SG82]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.