Factsheet for Zm00001d032784_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38401	Sorghum	nucleus	86.65	84.15
Os10t0463400-01	Rice	nucleus	47.18	46.63
Zm00001d036803_P001	Maize	cytosol	10.68	33.96
VIT_11s0052g01160.t01	Wine grape	cytosol	21.07	32.87
GSMUA_Achr5P13050_001	Banana	cytosol	22.26	32.75
AT5G49240.1	Thale cress	cytoskeleton, cytosol, nucleus	24.33	28.08
CDY56439	Canola	nucleus	22.85	28.0
CDX86245	Canola	nucleus	22.55	27.84
Bra037427.1-P	Field mustard	nucleus	22.55	27.84
Zm00001d011785_P001	Maize	nucleus	13.95	21.46
AT3G62670.1	Thale cress	nucleus	24.63	19.48
CDY33920	Canola	nucleus	24.63	19.17
CDY16482	Canola	nucleus	24.93	19.09
CDX77263	Canola	nucleus	25.22	18.89
CDY05641	Canola	nucleus	24.93	18.83
Bra020652.1-P	Field mustard	nucleus	24.63	18.82
CDX76652	Canola	nucleus	23.15	18.62
Bra014172.1-P	Field mustard	nucleus	24.63	18.49
CDY11437	Canola	nucleus	22.85	18.33
Bra041027.1-P	Field mustard	nucleus	22.85	18.33
PGSC0003DMT400090747	Potato	nucleus	30.27	18.25
Zm00001d041960_P001	Maize	nucleus	13.95	18.22
Zm00001d012128_P001	Maize	nucleus	31.75	17.74
Solyc12g099380.1.1	Tomato	nucleus	28.78	17.48
Zm00001d015521_P001	Maize	nucleus	32.64	17.43
Zm00001d036802_P001	Maize	nucleus	19.88	17.27
Zm00001d042463_P001	Maize	nucleus	31.16	17.07
Zm00001d045112_P001	Maize	nucleus	33.53	16.89
Zm00001d048046_P001	Maize	nucleus	34.12	16.76
VIT_07s0005g01010.t01	Wine grape	nucleus	26.41	16.67
CDY29358	Canola	nucleus	24.63	16.44
Bra032275.1-P	Field mustard	nucleus	24.63	16.44
Zm00001d028265_P002	Maize	nucleus	34.12	16.43
Zm00001d018380_P001	Maize	nucleus	28.78	15.75
CDY04335	Canola	nucleus	24.63	15.72
Zm00001d010280_P001	Maize	nucleus	13.95	15.72
Zm00001d042892_P001	Maize	nucleus	13.65	15.13
Zm00001d038191_P001	Maize	nucleus	13.65	14.74
Zm00001d046755_P001	Maize	nucleus	27.89	14.01
AT1G49190.2	Thale cress	nucleus	24.33	13.18
KRH60425	Soybean	nucleus	13.06	12.22
TraesCS7A01G539600.1	Wheat	nucleus	6.53	6.51
TraesCSU01G196300.1	Wheat	nucleus, plastid	0.59	0.6
TraesCSU01G179800.1	Wheat	nucleus, plastid	0.59	0.6

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	UniProt:A0A1D6KTY7	InterPro:CheY-like_superfamily
GO:GO:0000003	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0048576	InterPro:Homeobox-like_sf
InterPro:IPR001789	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants	ProteinID:ONM06048.1	PFAM:PF00072
PFAM:PF00249	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF27	InterPro:SANT/Myb
SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0008424FE1
EnsemblPlantsGene:Zm00001d032784	EnsemblPlants:Zm00001d032784_P001	EnsemblPlants:Zm00001d032784_T001	SEG:seg	:	:

Description

G2-like-transcription factor 45Two-component response regulator ARR12

Coordinates

chr1:+:238041004..238043016

Molecular Weight (calculated)

38294.2 Da

IEP (calculated)

5.239

GRAVY (calculated)

-0.465

Length

337 amino acids

Sequence
(BLAST)

001: MDRELWPCGL RVLVIDNNSS YLSVLEELLI KCSYKVTTYN DVRQAMSFIY GNIQIVDLII SDVFFPTEDG LLILQEVTSK FDIPTVIMSS NADTSIVMKY
101: ITSGASDFLI KPVRIEELKN IWQHVLRKQI GENRSCSNSA HHQHLDQVSI SYPPPAGIAP AGTTAREREM TTTANGTVTD IQDLRKSRLS WTMQLHRQFI
201: AAVNSLGEKA VPKKILETMK VKHLTREQVA SHLQKYRLHM RKVNQALHND DDTPPSSSLP NESNILRTEF DGSLNPTYFD QDGCTEYSLP KDDLSSGSDC
301: MLGERNNYSP QGFQDFRWDS DKQASETTYL WNFEADE

Best Arabidopsis Sequence Match ( AT1G67710.1 )
(BLAST)

001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S

Arabidopsis Description

ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.