Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032275.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY04335 | Canola | nucleus | 89.11 | 85.23 |
| CDY16482 | Canola | nucleus | 51.88 | 59.55 |
| CDX77263 | Canola | nucleus | 52.67 | 59.11 |
| CDX73905 | Canola | nucleus | 7.33 | 37.0 |
| CDY52720 | Canola | nucleus | 13.66 | 36.9 |
| AT1G49190.2 | Thale cress | nucleus | 43.37 | 35.21 |
| CDY54630 | Canola | cytosol | 10.3 | 33.55 |
| CDY54632 | Canola | cytosol | 9.7 | 33.11 |
| CDX76652 | Canola | nucleus | 26.93 | 32.46 |
| CDX82391 | Canola | cytosol | 9.5 | 32.43 |
| CDY11437 | Canola | nucleus | 26.93 | 32.38 |
| VIT_11s0052g01160.t01 | Wine grape | cytosol | 13.47 | 31.48 |
| CDX87845 | Canola | cytosol, extracellular | 7.13 | 26.87 |
| CDX73907 | Canola | nucleus | 6.93 | 25.93 |
| CDX86245 | Canola | nucleus | 13.86 | 25.64 |
| CDY56439 | Canola | nucleus | 13.86 | 25.45 |
| KXG38401 | Sorghum | nucleus | 17.03 | 24.78 |
| Zm00001d032784_P001 | Maize | nucleus | 16.44 | 24.63 |
| CDY64566 | Canola | nucleus | 18.02 | 24.2 |
| CDY09419 | Canola | nucleus | 17.82 | 23.87 |
| CDX75892 | Canola | nucleus | 20.2 | 22.57 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 9.9 | 21.83 |
| CDX95898 | Canola | nucleus | 21.19 | 21.19 |
| CDX92102 | Canola | nucleus | 20.79 | 20.92 |
| CDY68249 | Canola | nucleus | 18.02 | 20.82 |
| CDY33920 | Canola | nucleus | 17.82 | 20.79 |
| CDY05641 | Canola | nucleus | 18.22 | 20.63 |
| CDY13465 | Canola | nucleus | 20.4 | 19.88 |
| CDX72337 | Canola | nucleus | 20.4 | 19.69 |
| CDY28869 | Canola | nucleus | 19.41 | 19.33 |
| PGSC0003DMT400090747 | Potato | nucleus | 21.39 | 19.32 |
| CDX68803 | Canola | nucleus | 19.41 | 19.18 |
| VIT_07s0005g01010.t01 | Wine grape | nucleus | 20.2 | 19.1 |
| CDX68392 | Canola | nucleus | 9.9 | 19.08 |
| Os10t0463400-01 | Rice | nucleus | 12.87 | 19.06 |
| CDY07410 | Canola | nucleus | 19.21 | 19.06 |
| CDY02794 | Canola | nucleus | 17.82 | 18.87 |
| Solyc12g099380.1.1 | Tomato | nucleus | 20.59 | 18.74 |
| CDX82988 | Canola | nucleus | 9.31 | 18.15 |
| CDY01838 | Canola | nucleus | 17.62 | 17.8 |
| CDY35371 | Canola | nucleus | 20.2 | 17.56 |
| CDX96070 | Canola | nucleus | 17.82 | 17.54 |
| CDY70103 | Canola | nucleus | 20.0 | 17.5 |
| CDX82389 | Canola | nucleus | 20.79 | 17.24 |
| CDX90546 | Canola | nucleus | 20.0 | 17.12 |
| CDX79963 | Canola | nucleus | 8.32 | 17.0 |
| CDY09718 | Canola | nucleus | 20.2 | 16.97 |
| CDY53674 | Canola | nucleus | 8.32 | 16.94 |
| CDY61256 | Canola | nucleus | 8.91 | 16.42 |
| CDX99104 | Canola | nucleus | 9.11 | 15.86 |
| CDY32725 | Canola | nucleus | 18.81 | 15.25 |
| CDY02793 | Canola | nucleus | 18.81 | 15.18 |
| CDX70016 | Canola | nucleus | 18.02 | 15.17 |
| CDY36273 | Canola | mitochondrion | 7.13 | 15.06 |
| CDY08579 | Canola | nucleus | 7.13 | 14.88 |
| CDX98997 | Canola | nucleus | 17.62 | 14.86 |
| CDY00969 | Canola | nucleus | 8.32 | 14.79 |
| CDX98816 | Canola | nucleus | 7.52 | 14.56 |
| CDX81041 | Canola | nucleus | 16.24 | 14.49 |
| CDY52133 | Canola | nucleus | 7.13 | 14.4 |
| CDX78284 | Canola | nucleus | 15.84 | 14.08 |
| CDY67763 | Canola | nucleus | 16.44 | 13.97 |
| CDX80940 | Canola | nucleus | 6.73 | 13.93 |
| CDY49965 | Canola | mitochondrion | 9.11 | 13.65 |
| CDY32209 | Canola | nucleus | 11.68 | 12.5 |
| CDY34423 | Canola | nucleus | 11.68 | 12.42 |
| CDY14053 | Canola | nucleus | 15.45 | 10.43 |
| CDX86925 | Canola | nucleus | 13.66 | 10.19 |
| CDY30695 | Canola | nucleus | 11.49 | 7.7 |
| TraesCS7A01G539600.1 | Wheat | nucleus | 4.55 | 6.8 |
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 1.78 | 2.72 |
| TraesCSU01G196300.1 | Wheat | nucleus, plastid | 1.78 | 2.72 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078GXM1 | UniProt:A0A078GXM1 |
| EnsemblPlants:CDY29358 | ProteinID:CDY29358 | ProteinID:CDY29358.1 | InterPro:CheY-like_superfamily | ncoils:Coil | GO:GO:0000160 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00042935001 |
| InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:Myb_dom_plants | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF23 | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 |
| UniParc:UPI0002547C99 | SEG:seg | : | : | : | : |
Description
BnaA05g16250DBnaA05g16250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXM1]
Coordinates
chrLK032235:-:493484..495382
Molecular Weight (calculated)
57211.5 Da
IEP (calculated)
6.410
GRAVY (calculated)
-0.713
Length
505 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEASRTDDG DRTLFKQRET SQISSFLNEF PASANVLVVE PNFVTLRKMK NLMIKYGYQV TVYADAEAAL AFLRNCEHGI NLVIWDFHMP RINGIQALKI
101: ICTKMDLPVV IMSDDDRKTS VMQATVHGAC YYVMKPIRKE IIATIWQHIV RKRMMSKSGL IPPVQLDAVQ NHDGFKENKD DSMPVDQGNS EQNINMIGEK
201: AEKKPQIGEN LPIQSDSVQN NGSDQDNNDS WTKSPYNSEQ NMDGEERKQP KTRVVWTNDL QEKFLKAVDI LGGARKANPK PLLKMLEDMN IKGLTRRHVC
301: SHLQKYRLSL EGKEITQQMQ EFGWSSACTT SPLLGLNNVH TATSSLINGG ASYPVQENQY QNGYMEVNNN HAASSTLMNG RATYPVQDNQ YQNGYLGVNN
401: NQVMTNTMPY DFDHDHYLQK QKPEKASSID IPEDLGLAYT MPRLPYNLGH GNHLQHEQQH QLSHQWNNVM SNNEPELPSS NGVTGVGGTY PSLPYDPNEF
501: YNYNQ
101: ICTKMDLPVV IMSDDDRKTS VMQATVHGAC YYVMKPIRKE IIATIWQHIV RKRMMSKSGL IPPVQLDAVQ NHDGFKENKD DSMPVDQGNS EQNINMIGEK
201: AEKKPQIGEN LPIQSDSVQN NGSDQDNNDS WTKSPYNSEQ NMDGEERKQP KTRVVWTNDL QEKFLKAVDI LGGARKANPK PLLKMLEDMN IKGLTRRHVC
301: SHLQKYRLSL EGKEITQQMQ EFGWSSACTT SPLLGLNNVH TATSSLINGG ASYPVQENQY QNGYMEVNNN HAASSTLMNG RATYPVQDNQ YQNGYLGVNN
401: NQVMTNTMPY DFDHDHYLQK QKPEKASSID IPEDLGLAYT MPRLPYNLGH GNHLQHEQQH QLSHQWNNVM SNNEPELPSS NGVTGVGGTY PSLPYDPNEF
501: YNYNQ
001: MLVGKISGYE DNTRSLERET SEITSLLSQF PGNTNVLVVD TNFTTLLNMK QIMKQYAYQV SIETDAEKAL AFLTSCKHEI NIVIWDFHMP GIDGLQALKS
101: ITSKLDLPVV IMSDDNQTES VMKATFYGAC DYVVKPVKEE VMANIWQHIV RKRLIFKPDV APPKPRMTWS EVFQPVQSHL VPTDGLDRDH FDSITINGGN
201: GIQNMEKKQG KKPRKPRMTW TEELHQKFLE AIEIIGGIEK ANPKVLVECL QEMRIEGITR SNVASHLQKH RINLEENQIP QQTQGNGWAT AYGTLAPSLQ
301: GSDNVNTTIP SYLMNGPATL NQIQQNQYQN GFLTMNNNQI ITNPPPPLPY LDHHHQQQHQ SSPQFNYLMN NEELLQASGL SATDLELTYP SLPYDPQEYL
401: INGYNYN
101: ITSKLDLPVV IMSDDNQTES VMKATFYGAC DYVVKPVKEE VMANIWQHIV RKRLIFKPDV APPKPRMTWS EVFQPVQSHL VPTDGLDRDH FDSITINGGN
201: GIQNMEKKQG KKPRKPRMTW TEELHQKFLE AIEIIGGIEK ANPKVLVECL QEMRIEGITR SNVASHLQKH RINLEENQIP QQTQGNGWAT AYGTLAPSLQ
301: GSDNVNTTIP SYLMNGPATL NQIQQNQYQN GFLTMNNNQI ITNPPPPLPY LDHHHQQQHQ SSPQFNYLMN NEELLQASGL SATDLELTYP SLPYDPQEYL
401: INGYNYN
Arabidopsis Description
RR19response regulator 19 [Source:TAIR;Acc:AT1G49190]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.