Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54632 | Canola | cytosol | 97.97 | 97.97 |
| Bra001641.1-P | Field mustard | cytosol | 95.95 | 95.95 |
| CDY54630 | Canola | cytosol | 91.89 | 87.74 |
| CDY52720 | Canola | nucleus | 54.73 | 43.32 |
| CDX87845 | Canola | cytosol, extracellular | 32.43 | 35.82 |
| CDX75892 | Canola | nucleus | 84.46 | 27.65 |
| CDX92102 | Canola | nucleus | 88.51 | 26.1 |
| CDX95898 | Canola | nucleus | 87.16 | 25.54 |
| GSMUA_Achr5P16510_001 | Banana | cytosol, nucleus, plastid | 31.76 | 21.76 |
| CDX82389 | Canola | nucleus | 84.46 | 20.53 |
| CDY49965 | Canola | mitochondrion | 46.62 | 20.47 |
| CDY64566 | Canola | nucleus | 51.35 | 20.21 |
| CDY09419 | Canola | nucleus | 51.35 | 20.16 |
| CDX90546 | Canola | nucleus | 77.03 | 19.32 |
| AT3G16857.2 | Thale cress | nucleus | 89.86 | 19.28 |
| CDY09718 | Canola | nucleus | 77.03 | 18.97 |
| CDY56439 | Canola | nucleus | 33.78 | 18.18 |
| CDX86245 | Canola | nucleus | 33.11 | 17.95 |
| CDY68249 | Canola | nucleus | 50.68 | 17.16 |
| CDY01838 | Canola | nucleus | 54.73 | 16.2 |
| CDY28869 | Canola | nucleus | 55.41 | 16.17 |
| CDX96070 | Canola | nucleus | 55.41 | 15.98 |
| CDY07410 | Canola | nucleus | 54.73 | 15.91 |
| CDX68803 | Canola | nucleus | 54.73 | 15.85 |
| CDY13465 | Canola | nucleus | 55.41 | 15.83 |
| CDX72337 | Canola | nucleus | 55.41 | 15.68 |
| KRH12005 | Soybean | nucleus | 70.27 | 15.48 |
| PGSC0003DMT400065835 | Potato | nucleus | 70.27 | 15.41 |
| KRH37035 | Soybean | nucleus | 68.92 | 15.16 |
| Solyc01g065540.2.1 | Tomato | nucleus | 68.92 | 15.07 |
| CDY70103 | Canola | nucleus | 55.41 | 14.21 |
| CDY35371 | Canola | nucleus | 55.41 | 14.11 |
| CDY02794 | Canola | nucleus | 42.57 | 13.21 |
| CDY16482 | Canola | nucleus | 35.14 | 11.82 |
| CDX77263 | Canola | nucleus | 35.81 | 11.78 |
| CDY33920 | Canola | nucleus | 33.78 | 11.55 |
| CDY05641 | Canola | nucleus | 32.43 | 10.76 |
| CDX76652 | Canola | nucleus | 29.73 | 10.5 |
| CDY32725 | Canola | nucleus | 43.92 | 10.43 |
| CDY02793 | Canola | nucleus | 43.92 | 10.38 |
| CDY11437 | Canola | nucleus | 29.05 | 10.24 |
| CDY29358 | Canola | nucleus | 32.43 | 9.5 |
| CDX73905 | Canola | nucleus | 6.08 | 9.0 |
| CDY04335 | Canola | nucleus | 31.76 | 8.9 |
| CDX98997 | Canola | nucleus | 32.43 | 8.01 |
| CDX70016 | Canola | nucleus | 31.08 | 7.67 |
| CDY67763 | Canola | nucleus | 30.41 | 7.58 |
| CDX73907 | Canola | nucleus | 6.76 | 7.41 |
| CDY14053 | Canola | nucleus | 28.38 | 5.61 |
| CDX81041 | Canola | nucleus | 20.27 | 5.3 |
| CDX78284 | Canola | nucleus | 20.27 | 5.28 |
| CDY34423 | Canola | nucleus | 14.86 | 4.63 |
| CDY32209 | Canola | nucleus | 14.19 | 4.45 |
| CDX86925 | Canola | nucleus | 17.57 | 3.84 |
| CDY08579 | Canola | nucleus | 5.41 | 3.31 |
| CDY61256 | Canola | nucleus | 5.41 | 2.92 |
| CDY00969 | Canola | nucleus | 5.41 | 2.82 |
| CDX99104 | Canola | nucleus | 5.41 | 2.76 |
| CDX79963 | Canola | nucleus | 4.05 | 2.43 |
| CDY53674 | Canola | nucleus | 4.05 | 2.42 |
| CDX82988 | Canola | nucleus | 4.05 | 2.32 |
| CDX98816 | Canola | nucleus | 4.05 | 2.3 |
| CDX80940 | Canola | nucleus | 3.38 | 2.05 |
| CDY52133 | Canola | nucleus | 3.38 | 2.0 |
| CDX68392 | Canola | nucleus | 3.38 | 1.91 |
| CDY30695 | Canola | nucleus | 6.08 | 1.2 |
| CDY36273 | Canola | mitochondrion | 0.68 | 0.42 |
Protein Annotations
| EnsemblPlants:CDX82391 | EnsemblPlantsGene:GSBRNA2T00137513001 | Gene3D:3.40.50.2300 | GO:A0A078CYY1 | GO:GO:0000160 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:CheY-like_superfamily | InterPro:IPR001789 | InterPro:Sig_transdc_resp-reg_receiver |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF23 | PFAM:PF00072 | PFscan:PS50110 | ProteinID:CDX82391 | ProteinID:CDX82391.1 |
| SMART:SM00448 | SUPFAM:SSF52172 | UniParc:UPI0004EEA34B | MapMan:11.4.2.4 | MapMan:15.5.23 | : |
Description
BnaA03g34300D
Coordinates
chrLK031828:-:955506..956273
Molecular Weight (calculated)
16644.2 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.143
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSSGLRVLV VDDDPTCLAI LERMLRTCSY EVTKCNRAEM ALSLLRKNKH GFDIVISDVH MPDMDGFELL EHVGLQMDLP VISTVVLRGV THGAVDYLIK
101: PVRIEALQNI WQHVVRKRRS VPEHSDGEDA ADDNSSSVNG GKKWRSML
101: PVRIEALQNI WQHVVRKRRS VPEHSDGEDA ADDNSSSVNG GKKWRSML
001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S
Arabidopsis Description
ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.