Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90546 | Canola | nucleus | 89.52 | 91.19 |
| CDY52720 | Canola | nucleus | 25.79 | 82.89 |
| CDY54632 | Canola | cytosol | 19.47 | 79.05 |
| CDX82391 | Canola | cytosol | 18.97 | 77.03 |
| CDY54630 | Canola | cytosol | 19.47 | 75.48 |
| CDY32209 | Canola | nucleus | 53.41 | 68.01 |
| CDY34423 | Canola | nucleus | 53.08 | 67.16 |
| CDX75892 | Canola | nucleus | 49.25 | 65.49 |
| CDX95898 | Canola | nucleus | 54.41 | 64.75 |
| CDX92102 | Canola | nucleus | 53.91 | 64.54 |
| CDX82389 | Canola | nucleus | 58.9 | 58.13 |
| Solyc01g065540.2.1 | Tomato | nucleus | 52.41 | 46.53 |
| PGSC0003DMT400065835 | Potato | nucleus | 51.91 | 46.22 |
| KRH12005 | Soybean | nucleus | 50.58 | 45.24 |
| KRH37035 | Soybean | nucleus | 49.75 | 44.43 |
| CDX73905 | Canola | nucleus | 7.32 | 44.0 |
| CDY64566 | Canola | nucleus | 25.79 | 41.22 |
| CDY09419 | Canola | nucleus | 25.62 | 40.85 |
| CDX87845 | Canola | cytosol, extracellular | 8.65 | 38.81 |
| CDY56439 | Canola | nucleus | 16.64 | 36.36 |
| CDX86245 | Canola | nucleus | 16.31 | 35.9 |
| CDY68249 | Canola | nucleus | 25.62 | 35.24 |
| GSMUA_Achr5P16510_001 | Banana | cytosol, nucleus, plastid | 12.65 | 35.19 |
| CDY13465 | Canola | nucleus | 27.79 | 32.24 |
| CDX72337 | Canola | nucleus | 27.45 | 31.55 |
| CDX73907 | Canola | nucleus | 6.99 | 31.11 |
| CDX96070 | Canola | nucleus | 25.96 | 30.41 |
| CDY01838 | Canola | nucleus | 25.29 | 30.4 |
| CDY28869 | Canola | nucleus | 25.62 | 30.37 |
| CDX68803 | Canola | nucleus | 25.79 | 30.33 |
| CDY07410 | Canola | nucleus | 25.62 | 30.26 |
| CDY70103 | Canola | nucleus | 28.62 | 29.81 |
| CDY35371 | Canola | nucleus | 28.62 | 29.6 |
| CDY02794 | Canola | nucleus | 22.13 | 27.88 |
| CDY33920 | Canola | nucleus | 19.8 | 27.48 |
| CDY05641 | Canola | nucleus | 19.47 | 26.23 |
| CDY08579 | Canola | nucleus | 9.98 | 24.79 |
| CDY02793 | Canola | nucleus | 24.96 | 23.96 |
| CDY32725 | Canola | nucleus | 24.79 | 23.92 |
| CDX79963 | Canola | nucleus | 9.82 | 23.89 |
| CDY16482 | Canola | nucleus | 17.47 | 23.86 |
| CDY53674 | Canola | nucleus | 9.82 | 23.79 |
| CDX77263 | Canola | nucleus | 17.3 | 23.11 |
| CDX80940 | Canola | nucleus | 9.32 | 22.95 |
| CDY49965 | Canola | mitochondrion | 12.81 | 22.85 |
| CDY52133 | Canola | nucleus | 9.32 | 22.4 |
| CDX98816 | Canola | nucleus | 9.65 | 22.22 |
| CDX76652 | Canola | nucleus | 15.47 | 22.2 |
| CDY11437 | Canola | nucleus | 15.47 | 22.14 |
| CDX82988 | Canola | nucleus | 9.48 | 22.01 |
| CDY00969 | Canola | nucleus | 10.15 | 21.48 |
| CDY61256 | Canola | nucleus | 9.65 | 21.17 |
| CDX99104 | Canola | nucleus | 10.15 | 21.03 |
| CDX68392 | Canola | nucleus | 9.15 | 20.99 |
| CDY04335 | Canola | nucleus | 17.8 | 20.27 |
| CDY29358 | Canola | nucleus | 16.97 | 20.2 |
| CDX70016 | Canola | nucleus | 19.97 | 20.0 |
| CDX98997 | Canola | nucleus | 19.8 | 19.87 |
| CDY67763 | Canola | nucleus | 19.47 | 19.7 |
| CDY36273 | Canola | mitochondrion | 7.49 | 18.83 |
| CDX81041 | Canola | nucleus | 17.14 | 18.2 |
| CDX78284 | Canola | nucleus | 16.81 | 17.78 |
| CDY14053 | Canola | nucleus | 18.64 | 14.97 |
| CDX86925 | Canola | nucleus | 15.31 | 13.59 |
| CDY30695 | Canola | nucleus | 12.48 | 9.96 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078FCF1 | UniProt:A0A078FCF1 |
| EnsemblPlants:CDY09718 | ProteinID:CDY09718 | ProteinID:CDY09718.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00031391001 |
| InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00072 |
| PFAM:PF00249 | PIRSF:PIRSF036392 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF23 |
| InterPro:Response_reg_B-typ_pln | InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver |
| TIGRFAMs:TIGR01557 | UniParc:UPI0004EE7F04 | SEG:seg | : | : | : |
Description
BnaC07g33430DTwo-component response regulator [Source:UniProtKB/TrEMBL;Acc:A0A078FCF1]
Coordinates
chrLK031998:-:577307..580819
Molecular Weight (calculated)
66106.1 Da
IEP (calculated)
7.079
GRAVY (calculated)
-0.570
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNPGVVGGS SNSDPFPAGL RVLVVDDDPT CLMILERMLR TCLYRVTKCN RAGIALTLLR KNKNGFDIVI SDVHMPDMNG FKLLEHVGLE MDLPVIMMSA
101: DDSKSVVLKG VTHGAVDYLI KPVRIEALKN IWQHVVRKKR NVSEHSGSVE ETGGDRQQQQ RDDDDDGGGD NNSSSGNNEG NLRKRKEEEQ GDDKEDTSSL
201: KKPRVVWSVE LHQQFVAAVN HLGVDKAVPK KILEMMNVQG LTRENVASHL QKYRIYLKRL GGVSQHQGNM NHSFMTGQDP SYGQLNGFDL QGLATAGQLP
301: AQSLAQLQAA GLGRSSSSLI KPGTMSVDQR SIFTFQNSKS RFGDGHGQMM MNGGSGNKQT SLLHGVPTGH MRLQQQQMAG MRVADPSMQQ QQSMLSRRSL
401: LDDAVVVRNS SRVLPGATHS VFNNSFPLAS PPGMSVTDTK GGSSSATAAF CNPSYDILNN FPQQQHHNNN RVNEWDLPNM GMVFNSHQDT TTAAFSASEA
501: YSSSSTHKRK REAELVVEHG QNQQQPQSRS VNPMNQVYMN GGGSVRVKTE TVTCPPQATT MFHEQYSNQE DLLSALLKQE GFPLLDSEFD FEGYSFDNIP
601: V
101: DDSKSVVLKG VTHGAVDYLI KPVRIEALKN IWQHVVRKKR NVSEHSGSVE ETGGDRQQQQ RDDDDDGGGD NNSSSGNNEG NLRKRKEEEQ GDDKEDTSSL
201: KKPRVVWSVE LHQQFVAAVN HLGVDKAVPK KILEMMNVQG LTRENVASHL QKYRIYLKRL GGVSQHQGNM NHSFMTGQDP SYGQLNGFDL QGLATAGQLP
301: AQSLAQLQAA GLGRSSSSLI KPGTMSVDQR SIFTFQNSKS RFGDGHGQMM MNGGSGNKQT SLLHGVPTGH MRLQQQQMAG MRVADPSMQQ QQSMLSRRSL
401: LDDAVVVRNS SRVLPGATHS VFNNSFPLAS PPGMSVTDTK GGSSSATAAF CNPSYDILNN FPQQQHHNNN RVNEWDLPNM GMVFNSHQDT TTAAFSASEA
501: YSSSSTHKRK REAELVVEHG QNQQQPQSRS VNPMNQVYMN GGGSVRVKTE TVTCPPQATT MFHEQYSNQE DLLSALLKQE GFPLLDSEFD FEGYSFDNIP
601: V
001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV
Arabidopsis Description
ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.