Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81041 | Canola | nucleus | 91.37 | 91.7 |
| Bra005928.1-P | Field mustard | nucleus | 99.47 | 74.44 |
| CDX98997 | Canola | nucleus | 67.25 | 63.77 |
| CDY67763 | Canola | nucleus | 65.49 | 62.63 |
| CDX70016 | Canola | nucleus | 65.49 | 62.0 |
| AT5G07210.1 | Thale cress | nucleus | 65.49 | 59.9 |
| AT2G27070.1 | Thale cress | nucleus | 58.8 | 58.39 |
| CDY14053 | Canola | nucleus | 61.62 | 46.79 |
| CDY52720 | Canola | nucleus | 11.44 | 34.76 |
| CDX73905 | Canola | nucleus | 5.46 | 31.0 |
| CDX73907 | Canola | nucleus | 6.16 | 25.93 |
| Solyc11g072330.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 14.96 | 25.76 |
| CDX86245 | Canola | nucleus | 11.27 | 23.44 |
| CDY56439 | Canola | nucleus | 11.27 | 23.27 |
| PGSC0003DMT400035788 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 8.8 | 23.04 |
| CDY54630 | Canola | cytosol | 6.16 | 22.58 |
| Solyc03g026250.1.1 | Tomato | nucleus | 13.03 | 22.22 |
| CDY64566 | Canola | nucleus | 13.73 | 20.74 |
| CDY09419 | Canola | nucleus | 13.56 | 20.42 |
| CDX82391 | Canola | cytosol | 5.28 | 20.27 |
| CDY54632 | Canola | cytosol | 5.28 | 20.27 |
| Solyc07g019550.1.1 | Tomato | nucleus | 13.03 | 20.16 |
| CDX75892 | Canola | nucleus | 15.32 | 19.25 |
| CDX92102 | Canola | nucleus | 16.9 | 19.12 |
| CDX95898 | Canola | nucleus | 16.9 | 19.01 |
| CDY08579 | Canola | nucleus | 8.1 | 19.01 |
| CDX80940 | Canola | nucleus | 7.92 | 18.44 |
| CDY13465 | Canola | nucleus | 16.73 | 18.34 |
| CDX79963 | Canola | nucleus | 7.92 | 18.22 |
| CDY16482 | Canola | nucleus | 14.08 | 18.18 |
| CDX68803 | Canola | nucleus | 16.2 | 18.0 |
| CDX72337 | Canola | nucleus | 16.37 | 17.78 |
| CDX82988 | Canola | nucleus | 8.1 | 17.76 |
| CDY53674 | Canola | nucleus | 7.75 | 17.74 |
| KRH38615 | Soybean | nucleus | 16.37 | 17.61 |
| CDY34423 | Canola | nucleus | 14.61 | 17.47 |
| CDX76652 | Canola | nucleus | 12.85 | 17.42 |
| CDY68249 | Canola | nucleus | 13.38 | 17.39 |
| CDY11437 | Canola | nucleus | 12.85 | 17.38 |
| CDY32209 | Canola | nucleus | 14.44 | 17.37 |
| KRH09142 | Soybean | nucleus | 20.42 | 17.34 |
| CDY33920 | Canola | nucleus | 13.2 | 17.32 |
| CDY05641 | Canola | nucleus | 13.56 | 17.26 |
| CDY00969 | Canola | nucleus | 8.63 | 17.25 |
| CDY52133 | Canola | nucleus | 7.57 | 17.2 |
| CDX77263 | Canola | nucleus | 13.56 | 17.11 |
| CDY35371 | Canola | nucleus | 17.43 | 17.04 |
| CDX86925 | Canola | nucleus | 20.25 | 16.99 |
| CDY70103 | Canola | nucleus | 17.25 | 16.98 |
| CDY28869 | Canola | nucleus | 15.14 | 16.96 |
| CDY09718 | Canola | nucleus | 17.78 | 16.81 |
| CDX68392 | Canola | nucleus | 7.75 | 16.79 |
| CDY61256 | Canola | nucleus | 8.1 | 16.79 |
| CDX90546 | Canola | nucleus | 17.43 | 16.78 |
| CDY07410 | Canola | nucleus | 14.96 | 16.7 |
| VIT_16s0100g00420.t01 | Wine grape | nucleus | 17.25 | 16.55 |
| CDX99104 | Canola | nucleus | 8.45 | 16.55 |
| CDX98816 | Canola | nucleus | 7.57 | 16.48 |
| CDX87845 | Canola | cytosol, extracellular | 3.87 | 16.42 |
| CDX96070 | Canola | nucleus | 14.79 | 16.37 |
| CDY36273 | Canola | mitochondrion | 6.87 | 16.32 |
| CDY01838 | Canola | nucleus | 14.26 | 16.2 |
| CDX82389 | Canola | nucleus | 17.08 | 15.93 |
| CDY29358 | Canola | nucleus | 14.08 | 15.84 |
| CDY02794 | Canola | nucleus | 13.2 | 15.72 |
| VIT_16s0100g00430.t01 | Wine grape | nucleus | 13.56 | 15.49 |
| CDY04335 | Canola | nucleus | 14.26 | 15.34 |
| CDY32725 | Canola | nucleus | 14.61 | 13.32 |
| CDY02793 | Canola | nucleus | 14.61 | 13.26 |
| CDY30695 | Canola | nucleus | 14.96 | 11.29 |
| CDY49965 | Canola | mitochondrion | 5.28 | 8.9 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078CQC9 | EnsemblPlants:CDX78284 |
| ProteinID:CDX78284 | ProteinID:CDX78284.1 | InterPro:CheY-like_superfamily | ncoils:Coil | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00129631001 | InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:Myb_dom_plants | PFAM:PF00072 |
| PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF19 | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI0004EDDA70 | SEG:seg | : | : |
Description
BnaA03g01960D
Coordinates
chrLK031815:+:355..3702
Molecular Weight (calculated)
64482.7 Da
IEP (calculated)
6.249
GRAVY (calculated)
-0.648
Length
568 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLDPSFKEI SVIAVKDPIE ALSTLKTQRH NIDLIVTDYY MPHMNGLQLK KQITREFGNI PVIVMSSDSN IEHESLACGA KCFLPKPIRP TDIPQIYQVA
101: LTYKRNDKSI LWTEHNYRDT DVSIPQQIQL HTEQANVLKT NNKRFSPISD SRPVNSSNGS YVSTDGSGEN RKRKSNGGSG DDSRPLKKPK IKWTDCLHDL
201: FLQAIRYIGL DKAVPKKILE YMNLPYLTRE NIASHLQKYR IFLRKVAEQG FSCSRMLPTK GIDSIFLQAH LRDPCYNNYA SSSSSLYDTT INNRSFYSKP
301: IQSYGQSRLL SNTAEPVRFN QMPYNYMNRN LSFPIQPSQN EGRRSLFEPT VMANKTVQTS QAMGFGQHGL SAINGNSFNN NMVSSYGRLT PTQPGMMSYE
401: NLTPRPSNFS YGMQMFLNNE NTTYKPQAHD NATTQPNLEI PTLENLSLCD ELLCEISNFQ IDHNKQQEEA VSTNKFELPA NFETELNQFF SLEENGDGNF
501: VNINQGRSDG ETSNIVAAPE TNYPVFNMNP NHEQEQGVPG FVDWSSLDPK DFANEYDFVD SLLTNDMN
101: LTYKRNDKSI LWTEHNYRDT DVSIPQQIQL HTEQANVLKT NNKRFSPISD SRPVNSSNGS YVSTDGSGEN RKRKSNGGSG DDSRPLKKPK IKWTDCLHDL
201: FLQAIRYIGL DKAVPKKILE YMNLPYLTRE NIASHLQKYR IFLRKVAEQG FSCSRMLPTK GIDSIFLQAH LRDPCYNNYA SSSSSLYDTT INNRSFYSKP
301: IQSYGQSRLL SNTAEPVRFN QMPYNYMNRN LSFPIQPSQN EGRRSLFEPT VMANKTVQTS QAMGFGQHGL SAINGNSFNN NMVSSYGRLT PTQPGMMSYE
401: NLTPRPSNFS YGMQMFLNNE NTTYKPQAHD NATTQPNLEI PTLENLSLCD ELLCEISNFQ IDHNKQQEEA VSTNKFELPA NFETELNQFF SLEENGDGNF
501: VNINQGRSDG ETSNIVAAPE TNYPVFNMNP NHEQEQGVPG FVDWSSLDPK DFANEYDFVD SLLTNDMN
001: MASAQSFYNQ SSVLKINVMV VDDDHVFLDI MSRMLQHSKY RDPSVMEIAV IAVDDPKKAL STLKIQRDNI DLIITDYYMP GMNGLQLKKQ ITQEFGNLPV
101: LVMSSDTNKE EESLSCGAMG FIPKPIHPTD LTKIYQFALS NKRNGKSTLS TEQNHKDADV SVPQQITLVP EQADVLKTKR KNCSFKSDSR TVNSTNGSCV
201: STDGSRKNRK RKPNGGPSDD GESMSQPAKK KKIQWTDSLH DLFLQAIRHI GLDKAVPKKI LAFMSVPYLT RENVASHLQK YRIFLRRVAE QGLYSMLSDR
301: GIDSMFRQTH IKEPYFNYYT PSTSWYDTRL NNRSFYSKPV HGFGQSKLLS TTREPVCFNQ MPYNYMNRSS TYEPHRIGSG SNLTLPIQSN LSFPNQPSQN
401: EERRSFFEPP VMANKIAQTS QVLGFGQLGP SAISGHNFNN NMTSRYGSLI PSQPGPSHFS YGMQSFLNNE NVTYNPQPPA NATTQPNLDE LPQLENLNLY
501: NDFGNTSELP YNISNFQFDD NKHQQGEADP TKFELPAAKF STELNHEDDG DWTFVNINQG QSNGETSNTI ASPETNTPIL NINHNQNQGQ DVPEFNDWSF
601: LDPQELVDDD FMNSLFNNDM N
101: LVMSSDTNKE EESLSCGAMG FIPKPIHPTD LTKIYQFALS NKRNGKSTLS TEQNHKDADV SVPQQITLVP EQADVLKTKR KNCSFKSDSR TVNSTNGSCV
201: STDGSRKNRK RKPNGGPSDD GESMSQPAKK KKIQWTDSLH DLFLQAIRHI GLDKAVPKKI LAFMSVPYLT RENVASHLQK YRIFLRRVAE QGLYSMLSDR
301: GIDSMFRQTH IKEPYFNYYT PSTSWYDTRL NNRSFYSKPV HGFGQSKLLS TTREPVCFNQ MPYNYMNRSS TYEPHRIGSG SNLTLPIQSN LSFPNQPSQN
401: EERRSFFEPP VMANKIAQTS QVLGFGQLGP SAISGHNFNN NMTSRYGSLI PSQPGPSHFS YGMQSFLNNE NVTYNPQPPA NATTQPNLDE LPQLENLNLY
501: NDFGNTSELP YNISNFQFDD NKHQQGEADP TKFELPAAKF STELNHEDDG DWTFVNINQG QSNGETSNTI ASPETNTPIL NINHNQNQGQ DVPEFNDWSF
601: LDPQELVDDD FMNSLFNNDM N
Arabidopsis Description
ARR21response regulator 21 [Source:TAIR;Acc:AT5G07210]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.