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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400035788 Potato cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 48.77 82.49
Solyc03g026250.1.1 Tomato nucleus 25.89 28.53
Solyc11g072330.1.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 20.71 23.03
VIT_16s0100g00420.t01 Wine grape nucleus 29.16 18.07
Solyc10g080960.1.1 Tomato nucleus 10.9 15.04
Solyc06g005680.2.1 Tomato nucleus 10.9 15.04
VIT_16s0100g00430.t01 Wine grape nucleus 20.16 14.89
Solyc10g078310.1.1 Tomato nucleus 11.72 14.83
CDY67763 Canola nucleus 23.71 14.65
Solyc05g014260.2.1 Tomato nucleus 23.16 14.63
CDX98997 Canola nucleus 23.43 14.36
CDX70016 Canola nucleus 22.89 14.0
AT2G27070.1 Thale cress nucleus 21.25 13.64
CDX81041 Canola nucleus 20.44 13.25
AT5G07210.1 Thale cress nucleus 22.34 13.2
Solyc12g099380.1.1 Tomato nucleus 19.89 13.15
CDX78284 Canola nucleus 20.16 13.03
KRH09142 Soybean nucleus 23.71 13.0
Solyc07g005140.2.1 Tomato nucleus 23.43 12.93
Solyc01g065540.2.1 Tomato nucleus 23.71 12.85
Solyc01g091810.1.1 Tomato nucleus 20.16 12.8
Solyc05g054390.2.1 Tomato nucleus 22.89 12.67
Solyc04g008050.2.1 Tomato nucleus 22.34 12.54
Solyc06g076350.2.1 Tomato nucleus 10.63 12.11
Solyc12g010330.1.1 Tomato nucleus 22.89 11.86
CDX86925 Canola nucleus 21.25 11.52
Bra028705.1-P Field mustard nucleus 23.98 11.47
Bra005928.1-P Field mustard nucleus 23.71 11.46
Bra009284.1-P Field mustard nucleus 23.71 11.25
CDY14053 Canola nucleus 22.34 10.96
KRH38615 Soybean nucleus 14.71 10.23
CDY30695 Canola nucleus 15.26 7.44
Protein Annotations
Gene3D:1.10.10.60Gene3D:3.40.50.2300MapMan:35.1InterPro:CheY-like_superfamilyGO:GO:0000160GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:Homeobox-like_sfInterPro:IPR001789
UniProt:K4CCR7InterPro:Myb_dom_plantsPFAM:PF00072PFscan:PS50110PANTHER:PTHR43874PANTHER:PTHR43874:SF19
SMART:SM00448SUPFAM:SSF46689SUPFAM:SSF52172InterPro:Sig_transdc_resp-reg_receiverEnsemblPlantsGene:Solyc07g019550.1EnsemblPlants:Solyc07g019550.1.1
TIGRFAMs:TIGR01557UniParc:UPI000276C5B0SEG:seg:::
Description
No Description!
Coordinates
chr7:+:12083412..12087199
Molecular Weight (calculated)
41975.2 Da
IEP (calculated)
7.003
GRAVY (calculated)
-0.441
Length
367 amino acids
Sequence
(BLAST)
001: MEEQNNQFFE IIRCLLVDVD DSCLLITATF LKKSKFEVVT VKSAKDALGV LRSSGLSFEL VVTEVHMPEI NGFQLQQEIA KKFNIPVAFY SVDEKESTII
101: KGLESGVILF MGKPISQNDI IFLWKYAAMR KKIYKGKQVI NQQNQDDANE RIPHEVIHIE SSSPDSERDK SARKSEENKS EHSSSPPSKK TRIVWTDPLH
201: NKFVDVVSKL GMKEAHPRKI LDRMDTPELT RIHVASHLQK YRMDLKKDSR VQQLMPENSN VVDHVIETDH QDFHSCQREK ELARILCRHI NKMSHNIGLG
301: EASIELSTLQ QSYEITGNGG TGTTTDDFVM LDNVYSTELT SIISGSQLNV QSSNMVRFFK FFRLFSY
Best Arabidopsis Sequence Match ( AT2G01760.1 )
(BLAST)
001: MPINDQFPSG LRILVVDDDT SCLFILEKML LRLMYQVTIC SQADVALTIL RERKDSFDLV LSDVHMPGMN GYNLLQQVGL LEMDLPVIMM SVDGRTTTVM
101: TGINHGACDY LIKPIRPEEL KNIWQHVVRR KCVMKKELRS SQALEDNKNS GSLETVVVSV SECSEESLMK CRNKKKKKKR SVDRDDNEDD LLLDPGNSKK
201: SRVVWSIELH QQFVNAVNKL GIDKAVPKRI LELMNVPGLS RENVASHLQK FRLYLKRLSG EASQSNDSES TKRYENIQAL VSSGQLHPQT LAALFGQPID
301: NHHSASFGVW IPNDNLGRSQ NEHFSVDVSS ASNRPVSVAV HGLSSSANFR QRGDVNNNRI RQGYGSNVNE ESWILERSSR QR
Arabidopsis Description
ARR14response regulator 14 [Source:TAIR;Acc:AT2G01760]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.