Factsheet for Solyc01g091810.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400089008	Potato	nucleus	95.67	94.85
CDX73905	Canola	nucleus	6.57	38.0
Bra001378.1-P	Field mustard	nucleus	6.23	36.73
CDX73907	Canola	nucleus	7.09	30.37
Bra001377.1-P	Field mustard	nucleus	6.92	29.63
Solyc11g072330.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	14.53	25.45
Solyc07g019550.1.1	Tomato	nucleus	12.8	20.16
Solyc03g026250.1.1	Tomato	nucleus	11.42	19.82
Solyc05g054390.2.1	Tomato	nucleus	22.66	19.76
Solyc01g065540.2.1	Tomato	nucleus	22.66	19.35
Solyc06g005680.2.1	Tomato	nucleus	8.82	19.17
Solyc06g076350.2.1	Tomato	nucleus	10.55	18.94
Solyc10g080960.1.1	Tomato	nucleus	8.65	18.8
Solyc12g099380.1.1	Tomato	nucleus	17.99	18.74
Solyc10g078310.1.1	Tomato	nucleus	9.0	17.93
Solyc12g010330.1.1	Tomato	nucleus	21.63	17.66
Solyc07g005140.2.1	Tomato	nucleus	19.9	17.29
Solyc05g014260.2.1	Tomato	nucleus	17.3	17.21
Solyc04g008050.2.1	Tomato	nucleus	19.2	16.97

Protein Annotations

Gene3D:1.10.10.60	Gene3D:3.40.50.2300	MapMan:35.1	InterPro:CheY-like_superfamily	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:K4AZC1	InterPro:Myb_dom_plants	PANTHER:PTHR31442
PANTHER:PTHR31442:SF12	SUPFAM:SSF46689	SUPFAM:SSF52172	EnsemblPlantsGene:Solyc01g091810.1	EnsemblPlants:Solyc01g091810.1.1	TIGRFAMs:TIGR01557
UniParc:UPI00027683D4	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:85365298..85367741

Molecular Weight (calculated)

65239.4 Da

IEP (calculated)

5.154

GRAVY (calculated)

-0.579

Length

578 amino acids

Sequence
(BLAST)

001: MDIPANSSVM GTKNICILLV LDDFTCHNIV SDMLHNQTYQ VLHVGKTMDT LNAVWERKSI FNLVLTNIHR LNTNGVDILQ IIKNKLNLPT IFMSPDDTRC
101: ENQVQDCSVG AYVVSFSDTN EMNKFWQMVL EKEKGRKTVV NQEENDSRLP QNVTAETSRE NTTSADTDVA IKAHDLKGKR KANSEENRDI EKKRRVVWTP
201: KMHQSFLQAI QYLGYEKAVP KKIVEIMNEP GLTREHVASH LQKYRMCIKR AQESSAASIY DQILTNDANA KCFQVQPYLS PLNFSGSRGY AHSIQQPFQN
301: HFQQGTGGMN CPTSGQMGSF QQQNSLLDLQ QADHNGLIGQ HSTFMPRIAH NSNFRVYGDK RKNMLFSIQS GNENQPTNSS NSDLEFLGFR LSTDGKSVNF
401: GHKSSSCTVI PNNAYSGLCS SISEDYIHKQ QSSPKFLETP IENTLIQSSS VQPENLTFNH TSNSISQQQN LLLFDNAENT ISCQIPEIPD SFIPQEQLAP
501: QPSSKDLEDY SAILFGDDEV YVPSLENYDS IQQQYSAPEL PQITLEANSL GTEIDIKSLL ETTEDRSTQL FWEDNEFL

Best Arabidopsis Sequence Match ( AT2G01760.1 )
(BLAST)

001: MPINDQFPSG LRILVVDDDT SCLFILEKML LRLMYQVTIC SQADVALTIL RERKDSFDLV LSDVHMPGMN GYNLLQQVGL LEMDLPVIMM SVDGRTTTVM
101: TGINHGACDY LIKPIRPEEL KNIWQHVVRR KCVMKKELRS SQALEDNKNS GSLETVVVSV SECSEESLMK CRNKKKKKKR SVDRDDNEDD LLLDPGNSKK
201: SRVVWSIELH QQFVNAVNKL GIDKAVPKRI LELMNVPGLS RENVASHLQK FRLYLKRLSG EASQSNDSES TKRYENIQAL VSSGQLHPQT LAALFGQPID
301: NHHSASFGVW IPNDNLGRSQ NEHFSVDVSS ASNRPVSVAV HGLSSSANFR QRGDVNNNRI RQGYGSNVNE ESWILERSSR QR

Arabidopsis Description

ARR14response regulator 14 [Source:TAIR;Acc:AT2G01760]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.