Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400060506 | Potato | nucleus | 97.74 | 97.74 |
| Solyc01g065540.2.1 | Tomato | nucleus | 74.36 | 72.82 |
| Solyc12g099380.1.1 | Tomato | nucleus | 33.48 | 40.0 |
| GSMUA_Achr5P16510_001 | Banana | cytosol, nucleus, plastid | 12.67 | 38.89 |
| Solyc04g008050.2.1 | Tomato | nucleus | 36.95 | 37.46 |
| Solyc07g005140.2.1 | Tomato | nucleus | 32.58 | 32.48 |
| Solyc12g010330.1.1 | Tomato | nucleus | 34.09 | 31.92 |
| Solyc05g014260.2.1 | Tomato | nucleus | 26.7 | 30.46 |
| Solyc10g080960.1.1 | Tomato | nucleus | 11.76 | 29.32 |
| Solyc11g072330.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 14.03 | 28.18 |
| Solyc10g078310.1.1 | Tomato | nucleus | 11.92 | 27.24 |
| Solyc03g026250.1.1 | Tomato | nucleus | 13.42 | 26.73 |
| Solyc06g005680.2.1 | Tomato | nucleus | 10.56 | 26.32 |
| Solyc06g076350.2.1 | Tomato | nucleus | 11.16 | 22.98 |
| Solyc07g019550.1.1 | Tomato | nucleus | 12.67 | 22.89 |
| Solyc01g091810.1.1 | Tomato | nucleus | 19.76 | 22.66 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | GO:GO:0000160 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:IPR017930 | UniProt:K4C2B7 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| PFAM:PF00072 | PFAM:PF00249 | PIRSF:PIRSF036392 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 |
| PANTHER:PTHR43874:SF23 | InterPro:Response_reg_B-typ_pln | InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 |
| InterPro:Sig_transdc_resp-reg_receiver | EnsemblPlantsGene:Solyc05g054390.2 | EnsemblPlants:Solyc05g054390.2.1 | TIGRFAMs:TIGR01557 | UniParc:UPI0002766ADD | SEG:seg |
Description
Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:K4C2B7]
Coordinates
chr5:+:64314429..64319855
Molecular Weight (calculated)
73392.9 Da
IEP (calculated)
5.988
GRAVY (calculated)
-0.529
Length
663 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLGVGSVVK TMSGASCSVS WKSGGSDKVS DQFPAGLRVL VVDDDPTCLR ILEKMLRNCH YEVTKSNRVE LALSMLRENR NGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KDVVMKGVTH GACDYLIKPV RIEALKNIWQ HVIRKKKHEW KDRDFDQSTS VEDGDQQQKP PEDVDYSSSA NEGNWKSSKR
201: RKEEEDETEE RDDSSTLKKP RVVWSVELHQ QFVQAVNQLG IDKAVPKKIL ELMNVPGLTR ENVASHLQKY RLYLRRLSGV SQHQNGLNNS FMGHPEATYG
301: TMTSFNGLEL QALAATGQLP AQSLATLQAA ALGRSATKSA ISMPLVDQRN LFSFENPKLR FSEGQQPLNN SNKQINLLHG IPTTMEPKQL ADLHQSSQSF
401: VAMNMQGNAR MQQNNALLMH MSQQQQQSSR AQMLNETNNG HVSRPPLSMS QPAAVLSRNS IVDNVRGPIY NPVSQTSSIV DFSLNQTTEL QNNSFPLVSS
501: NSGMSTLTSK RLLQEEVNSD IKGSRGFPPG YDIFEELHQQ KTQDWGLPNI GSNFGASDHS SIPGTLDVSP SMLVQQGISS MKKNGPNGIA PMGGPQLNLF
601: SGGNLLPVKA EQLPDTTYQN TFFPEQFGQD DLMSALLKQQ ESVGQVETEF GFDGYSPLDN LPV
101: LEHVGLEMDL PVIMMSADDS KDVVMKGVTH GACDYLIKPV RIEALKNIWQ HVIRKKKHEW KDRDFDQSTS VEDGDQQQKP PEDVDYSSSA NEGNWKSSKR
201: RKEEEDETEE RDDSSTLKKP RVVWSVELHQ QFVQAVNQLG IDKAVPKKIL ELMNVPGLTR ENVASHLQKY RLYLRRLSGV SQHQNGLNNS FMGHPEATYG
301: TMTSFNGLEL QALAATGQLP AQSLATLQAA ALGRSATKSA ISMPLVDQRN LFSFENPKLR FSEGQQPLNN SNKQINLLHG IPTTMEPKQL ADLHQSSQSF
401: VAMNMQGNAR MQQNNALLMH MSQQQQQSSR AQMLNETNNG HVSRPPLSMS QPAAVLSRNS IVDNVRGPIY NPVSQTSSIV DFSLNQTTEL QNNSFPLVSS
501: NSGMSTLTSK RLLQEEVNSD IKGSRGFPPG YDIFEELHQQ KTQDWGLPNI GSNFGASDHS SIPGTLDVSP SMLVQQGISS MKKNGPNGIA PMGGPQLNLF
601: SGGNLLPVKA EQLPDTTYQN TFFPEQFGQD DLMSALLKQQ ESVGQVETEF GFDGYSPLDN LPV
001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV
Arabidopsis Description
ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.