Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g072330.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 26.73 | 26.97 |
| Solyc07g019550.1.1 | Tomato | nucleus | 28.53 | 25.89 |
| Solyc10g080960.1.1 | Tomato | nucleus | 11.71 | 14.66 |
| Solyc12g099380.1.1 | Tomato | nucleus | 24.32 | 14.59 |
| VIT_16s0100g00420.t01 | Wine grape | nucleus | 24.62 | 13.85 |
| CDX70016 | Canola | nucleus | 24.62 | 13.67 |
| CDY67763 | Canola | nucleus | 24.32 | 13.64 |
| Solyc05g014260.2.1 | Tomato | nucleus | 23.72 | 13.6 |
| CDX98997 | Canola | nucleus | 24.32 | 13.52 |
| AT2G27070.1 | Thale cress | nucleus | 23.12 | 13.46 |
| Solyc01g065540.2.1 | Tomato | nucleus | 27.33 | 13.44 |
| Solyc05g054390.2.1 | Tomato | nucleus | 26.73 | 13.42 |
| AT5G07210.1 | Thale cress | nucleus | 24.92 | 13.37 |
| Solyc10g078310.1.1 | Tomato | nucleus | 11.41 | 13.1 |
| CDX81041 | Canola | nucleus | 22.22 | 13.07 |
| CDX78284 | Canola | nucleus | 22.22 | 13.03 |
| Solyc06g005680.2.1 | Tomato | nucleus | 10.21 | 12.78 |
| KRH09142 | Soybean | nucleus | 25.23 | 12.56 |
| Solyc07g005140.2.1 | Tomato | nucleus | 24.62 | 12.33 |
| Solyc12g010330.1.1 | Tomato | nucleus | 24.92 | 11.72 |
| Solyc04g008050.2.1 | Tomato | nucleus | 22.82 | 11.62 |
| Bra005928.1-P | Field mustard | nucleus | 26.13 | 11.46 |
| Solyc01g091810.1.1 | Tomato | nucleus | 19.82 | 11.42 |
| VIT_16s0100g00430.t01 | Wine grape | nucleus | 16.52 | 11.07 |
| Bra028705.1-P | Field mustard | nucleus | 24.92 | 10.82 |
| CDY14053 | Canola | nucleus | 24.02 | 10.7 |
| Bra009284.1-P | Field mustard | nucleus | 24.62 | 10.61 |
| Solyc06g076350.2.1 | Tomato | nucleus | 9.91 | 10.25 |
| KRH38615 | Soybean | nucleus | 16.22 | 10.23 |
| CDX86925 | Canola | nucleus | 19.22 | 9.45 |
| CDY30695 | Canola | nucleus | 12.01 | 5.31 |
Protein Annotations
| Gene3D:1.10.10.60 | Gene3D:3.40.50.2300 | MapMan:35.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:IPR001789 | UniProt:K4BF98 | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF19 |
| SMART:SM00448 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | EnsemblPlantsGene:Solyc03g026250.1 | EnsemblPlants:Solyc03g026250.1.1 | UniParc:UPI00027690A2 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:3686918..3689925
Molecular Weight (calculated)
37915.1 Da
IEP (calculated)
4.890
GRAVY (calculated)
-0.380
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVENECYDN EFLEKISILV VDDDTSSLLI TSELLKKENF KVVTVKNANE ALSTLQINEN SFDLVIIEVR VPVMNGLQLQ QQITNGFNIP VVLISDDKSE
101: CGIIQGFESG AVFLMVKPIS QNDVHELWQY AIMQRKKKKN RGKQGIVQEN TNEEIVAENL ITPPKKTRLV WTEYLHNKFL EAITILGLKI TAPIDTSRKP
201: ISKSRIGNAR KAIQLAATST QQLMTENSNS VTAHNDELVA PFQRDPKDKI FTDMLSYHLS REYRDRINNF YSIMNSNMQI TNASNNVQSS IMENNNIEEG
301: TNLSFVDGNN QYQQAYFPWV DHTLDQASLS YIL
101: CGIIQGFESG AVFLMVKPIS QNDVHELWQY AIMQRKKKKN RGKQGIVQEN TNEEIVAENL ITPPKKTRLV WTEYLHNKFL EAITILGLKI TAPIDTSRKP
201: ISKSRIGNAR KAIQLAATST QQLMTENSNS VTAHNDELVA PFQRDPKDKI FTDMLSYHLS REYRDRINNF YSIMNSNMQI TNASNNVQSS IMENNNIEEG
301: TNLSFVDGNN QYQQAYFPWV DHTLDQASLS YIL
001: MTMEQEIEVL DQFPVGMRVL AVDDDQTCLR ILQTLLQRCQ YHVTTTNQAQ TALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVKH GACDYLLKPV RIEELKNIWQ HVVRKSKLKK NKSNVSNGSG NCDKANRKRK EQYEEEEEEE RGNDNDDPTA QKKPRVLWTH ELHNKFLAAV
201: DHLGVERAVP KKILDLMNVD KLTRENVASH LQKFRVALKK VSDDAIQQAN RAAIDSHFMQ MNSQKGLGGF YHHHRGIPVG SGQFHGGTTM MRHYSSNRNL
301: GRLNSLGAGM FQPVSSSFPR NHNDGGNILQ GLPLEELQIN NNINRAFPSF TSQQNSPMVA PSNLLLLEGN PQSSSLPSNP GFSPHFEISK RLEHWSNAAL
401: STNIPQSDVH SKPDTLEWNA FCDSASPLVN PNLDTNPASL CRNTGFGSTN AAQTDFFYPL QMNQQPANNS GPVTEAQLFR SSNPNEGLLM GQQKLQSGLM
501: ASDAGSLDDI VNSLMTQEQS QSDFSEGDWD LDGLAHSEHA YEKLHFPFSL SA
101: PKYVMKGVKH GACDYLLKPV RIEELKNIWQ HVVRKSKLKK NKSNVSNGSG NCDKANRKRK EQYEEEEEEE RGNDNDDPTA QKKPRVLWTH ELHNKFLAAV
201: DHLGVERAVP KKILDLMNVD KLTRENVASH LQKFRVALKK VSDDAIQQAN RAAIDSHFMQ MNSQKGLGGF YHHHRGIPVG SGQFHGGTTM MRHYSSNRNL
301: GRLNSLGAGM FQPVSSSFPR NHNDGGNILQ GLPLEELQIN NNINRAFPSF TSQQNSPMVA PSNLLLLEGN PQSSSLPSNP GFSPHFEISK RLEHWSNAAL
401: STNIPQSDVH SKPDTLEWNA FCDSASPLVN PNLDTNPASL CRNTGFGSTN AAQTDFFYPL QMNQQPANNS GPVTEAQLFR SSNPNEGLLM GQQKLQSGLM
501: ASDAGSLDDI VNSLMTQEQS QSDFSEGDWD LDGLAHSEHA YEKLHFPFSL SA
Arabidopsis Description
ARR10Two-component response regulator ARR10 [Source:UniProtKB/Swiss-Prot;Acc:O49397]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.