Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70016 | Canola | nucleus | 94.16 | 94.0 |
| CDY67763 | Canola | nucleus | 67.61 | 68.18 |
| CDX81041 | Canola | nucleus | 63.61 | 67.31 |
| CDX78284 | Canola | nucleus | 63.77 | 67.25 |
| AT5G07210.1 | Thale cress | nucleus | 67.28 | 64.9 |
| AT2G27070.1 | Thale cress | nucleus | 60.1 | 62.94 |
| CDY14053 | Canola | nucleus | 63.11 | 50.53 |
| CDX73905 | Canola | nucleus | 6.34 | 38.0 |
| CDY52720 | Canola | nucleus | 10.68 | 34.22 |
| CDY54630 | Canola | cytosol | 8.85 | 34.19 |
| CDX82391 | Canola | cytosol | 8.01 | 32.43 |
| CDY54632 | Canola | cytosol | 8.01 | 32.43 |
| CDX73907 | Canola | nucleus | 6.84 | 30.37 |
| Solyc11g072330.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 15.53 | 28.18 |
| PGSC0003DMT400035788 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 10.02 | 27.65 |
| CDX86245 | Canola | nucleus | 12.19 | 26.74 |
| CDY56439 | Canola | nucleus | 12.19 | 26.55 |
| CDY64566 | Canola | nucleus | 15.36 | 24.47 |
| CDY09419 | Canola | nucleus | 15.36 | 24.4 |
| Solyc03g026250.1.1 | Tomato | nucleus | 13.52 | 24.32 |
| Solyc07g019550.1.1 | Tomato | nucleus | 14.36 | 23.43 |
| CDX92102 | Canola | nucleus | 19.37 | 23.11 |
| CDX75892 | Canola | nucleus | 17.36 | 23.01 |
| CDX95898 | Canola | nucleus | 19.2 | 22.77 |
| CDX68803 | Canola | nucleus | 18.7 | 21.92 |
| CDY68249 | Canola | nucleus | 15.53 | 21.28 |
| CDY13465 | Canola | nucleus | 18.36 | 21.24 |
| CDX87845 | Canola | cytosol, extracellular | 4.67 | 20.9 |
| CDX72337 | Canola | nucleus | 18.03 | 20.65 |
| CDX80940 | Canola | nucleus | 8.35 | 20.49 |
| CDY08579 | Canola | nucleus | 8.01 | 19.83 |
| CDX90546 | Canola | nucleus | 19.53 | 19.83 |
| CDY09718 | Canola | nucleus | 19.87 | 19.8 |
| CDX82988 | Canola | nucleus | 8.51 | 19.69 |
| CDY16482 | Canola | nucleus | 14.36 | 19.55 |
| CDX79963 | Canola | nucleus | 8.01 | 19.43 |
| CDY53674 | Canola | nucleus | 8.01 | 19.35 |
| CDX76652 | Canola | nucleus | 13.52 | 19.33 |
| CDY35371 | Canola | nucleus | 18.7 | 19.28 |
| CDY70103 | Canola | nucleus | 18.53 | 19.24 |
| CDY52133 | Canola | nucleus | 8.01 | 19.2 |
| CDX98816 | Canola | nucleus | 8.35 | 19.16 |
| CDY28869 | Canola | nucleus | 16.19 | 19.13 |
| VIT_16s0100g00420.t01 | Wine grape | nucleus | 18.86 | 19.09 |
| CDY02794 | Canola | nucleus | 15.19 | 19.08 |
| CDY11437 | Canola | nucleus | 13.36 | 19.05 |
| CDX77263 | Canola | nucleus | 14.19 | 18.89 |
| CDX82389 | Canola | nucleus | 19.03 | 18.72 |
| CDY33920 | Canola | nucleus | 13.52 | 18.71 |
| CDY07410 | Canola | nucleus | 15.86 | 18.66 |
| CDY61256 | Canola | nucleus | 8.51 | 18.61 |
| CDX96070 | Canola | nucleus | 15.86 | 18.52 |
| KRH09142 | Soybean | nucleus | 20.53 | 18.39 |
| CDX68392 | Canola | nucleus | 8.01 | 18.32 |
| CDX99104 | Canola | nucleus | 8.85 | 18.28 |
| CDY01838 | Canola | nucleus | 15.19 | 18.2 |
| CDY05641 | Canola | nucleus | 13.36 | 17.94 |
| CDX86925 | Canola | nucleus | 20.03 | 17.73 |
| CDY29358 | Canola | nucleus | 14.86 | 17.62 |
| CDY34423 | Canola | nucleus | 13.69 | 17.26 |
| CDY00969 | Canola | nucleus | 8.18 | 17.25 |
| CDY32209 | Canola | nucleus | 13.52 | 17.16 |
| KRH38615 | Soybean | nucleus | 15.03 | 17.05 |
| CDY04335 | Canola | nucleus | 14.86 | 16.86 |
| CDY36273 | Canola | mitochondrion | 6.68 | 16.74 |
| CDY32725 | Canola | nucleus | 17.2 | 16.53 |
| CDY02793 | Canola | nucleus | 17.2 | 16.45 |
| VIT_16s0100g00430.t01 | Wine grape | nucleus | 13.36 | 16.1 |
| CDY49965 | Canola | mitochondrion | 7.18 | 12.76 |
| CDY30695 | Canola | nucleus | 14.19 | 11.29 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078ED59 | EnsemblPlants:CDX98997 |
| ProteinID:CDX98997 | ProteinID:CDX98997.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00107118001 | InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| PFAM:PF00072 | PFAM:PF00249 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF19 |
| InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 |
| UniParc:UPI0004EE0E08 | SEG:seg | : | : | : | : |
Description
BnaC09g48380D
Coordinates
chrLK031907:-:1056555..1060530
Molecular Weight (calculated)
67784.8 Da
IEP (calculated)
5.342
GRAVY (calculated)
-0.698
Length
599 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFAQVFYNQ SSVLRINVMV VDDDPVFLQI MSRRLENLKY RDPSTMEITV IAVKDSREAL STLKIERNNI DLIVTDYYMP DMNGLQLKKQ ITQEFGNLPV
101: IVMSSDTNKE HESLTCGAMG FIQKPINATE LTKIYQLALT CKRNGKSTLW TENNHNDTDV SISQQIQLVP EQDNLMMTKK KKFSPRPDAR SMNSSNGTCV
201: STDASRKNKK RKANGGSGDD FESLSQPSMK SKITWTDDLH DLFLQAIRHI GLDKAVPKKI LEFMNVSYLT RENVASHLQK YRQFLRKVAE RSSLCSNMLP
301: SNGIDSIYPY PHTREPYYNN YTSSSSSWYG TSLNNRSFYS KPGHGLGQSR LLSNTSDPVC FSQMPHSYMN HNLNYSSQNE GRRSFLEPTA NKTSQTSQAL
401: GFEQHGLSAI NGSGFNNNTL ISYGSLTTHQ PGSSNFSYGL QSFLNNENTA YEPQPHPHAQ AAAQKNIEIP QQENLSLFDE LGNINELLCD ISNFELDHNK
501: QQEAVSTNQF ELPANVSTEM NQFFSLEDDD WTFVNTNQGH SNGETTNNVA PETNSQTFNM STNHNQEQDA QDFVDWSFLN PEDLANEYDF MDSLFNGMN
101: IVMSSDTNKE HESLTCGAMG FIQKPINATE LTKIYQLALT CKRNGKSTLW TENNHNDTDV SISQQIQLVP EQDNLMMTKK KKFSPRPDAR SMNSSNGTCV
201: STDASRKNKK RKANGGSGDD FESLSQPSMK SKITWTDDLH DLFLQAIRHI GLDKAVPKKI LEFMNVSYLT RENVASHLQK YRQFLRKVAE RSSLCSNMLP
301: SNGIDSIYPY PHTREPYYNN YTSSSSSWYG TSLNNRSFYS KPGHGLGQSR LLSNTSDPVC FSQMPHSYMN HNLNYSSQNE GRRSFLEPTA NKTSQTSQAL
401: GFEQHGLSAI NGSGFNNNTL ISYGSLTTHQ PGSSNFSYGL QSFLNNENTA YEPQPHPHAQ AAAQKNIEIP QQENLSLFDE LGNINELLCD ISNFELDHNK
501: QQEAVSTNQF ELPANVSTEM NQFFSLEDDD WTFVNTNQGH SNGETTNNVA PETNSQTFNM STNHNQEQDA QDFVDWSFLN PEDLANEYDF MDSLFNGMN
001: MASAQSFYNQ SSVLKINVMV VDDDHVFLDI MSRMLQHSKY RDPSVMEIAV IAVDDPKKAL STLKIQRDNI DLIITDYYMP GMNGLQLKKQ ITQEFGNLPV
101: LVMSSDTNKE EESLSCGAMG FIPKPIHPTD LTKIYQFALS NKRNGKSTLS TEQNHKDADV SVPQQITLVP EQADVLKTKR KNCSFKSDSR TVNSTNGSCV
201: STDGSRKNRK RKPNGGPSDD GESMSQPAKK KKIQWTDSLH DLFLQAIRHI GLDKAVPKKI LAFMSVPYLT RENVASHLQK YRIFLRRVAE QGLYSMLSDR
301: GIDSMFRQTH IKEPYFNYYT PSTSWYDTRL NNRSFYSKPV HGFGQSKLLS TTREPVCFNQ MPYNYMNRSS TYEPHRIGSG SNLTLPIQSN LSFPNQPSQN
401: EERRSFFEPP VMANKIAQTS QVLGFGQLGP SAISGHNFNN NMTSRYGSLI PSQPGPSHFS YGMQSFLNNE NVTYNPQPPA NATTQPNLDE LPQLENLNLY
501: NDFGNTSELP YNISNFQFDD NKHQQGEADP TKFELPAAKF STELNHEDDG DWTFVNINQG QSNGETSNTI ASPETNTPIL NINHNQNQGQ DVPEFNDWSF
601: LDPQELVDDD FMNSLFNNDM N
101: LVMSSDTNKE EESLSCGAMG FIPKPIHPTD LTKIYQFALS NKRNGKSTLS TEQNHKDADV SVPQQITLVP EQADVLKTKR KNCSFKSDSR TVNSTNGSCV
201: STDGSRKNRK RKPNGGPSDD GESMSQPAKK KKIQWTDSLH DLFLQAIRHI GLDKAVPKKI LAFMSVPYLT RENVASHLQK YRIFLRRVAE QGLYSMLSDR
301: GIDSMFRQTH IKEPYFNYYT PSTSWYDTRL NNRSFYSKPV HGFGQSKLLS TTREPVCFNQ MPYNYMNRSS TYEPHRIGSG SNLTLPIQSN LSFPNQPSQN
401: EERRSFFEPP VMANKIAQTS QVLGFGQLGP SAISGHNFNN NMTSRYGSLI PSQPGPSHFS YGMQSFLNNE NVTYNPQPPA NATTQPNLDE LPQLENLNLY
501: NDFGNTSELP YNISNFQFDD NKHQQGEADP TKFELPAAKF STELNHEDDG DWTFVNINQG QSNGETSNTI ASPETNTPIL NINHNQNQGQ DVPEFNDWSF
601: LDPQELVDDD FMNSLFNNDM N
Arabidopsis Description
ARR21response regulator 21 [Source:TAIR;Acc:AT5G07210]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.