Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra041027.1-P | Field mustard | nucleus | 96.66 | 96.43 |
| CDY11437 | Canola | nucleus | 96.18 | 95.95 |
| AT3G62670.1 | Thale cress | nucleus | 55.13 | 54.23 |
| CDY52720 | Canola | nucleus | 15.99 | 35.83 |
| CDX73905 | Canola | nucleus | 8.11 | 34.0 |
| CDY16482 | Canola | nucleus | 34.37 | 32.73 |
| CDX77263 | Canola | nucleus | 35.08 | 32.67 |
| CDY54630 | Canola | cytosol | 11.69 | 31.61 |
| CDX82391 | Canola | cytosol | 10.5 | 29.73 |
| CDY54632 | Canola | cytosol | 10.02 | 28.38 |
| CDY29358 | Canola | nucleus | 32.46 | 26.93 |
| VIT_11s0052g01160.t01 | Wine grape | cytosol | 13.84 | 26.85 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 14.32 | 26.2 |
| CDX73907 | Canola | nucleus | 8.35 | 25.93 |
| CDY04335 | Canola | nucleus | 32.22 | 25.57 |
| Zm00001d032784_P001 | Maize | nucleus | 18.62 | 23.15 |
| KXG38401 | Sorghum | nucleus | 18.85 | 22.77 |
| CDX75892 | Canola | nucleus | 24.11 | 22.35 |
| CDY64566 | Canola | nucleus | 19.57 | 21.81 |
| CDY09419 | Canola | nucleus | 19.57 | 21.75 |
| CDX87845 | Canola | cytosol, extracellular | 6.92 | 21.64 |
| CDX86245 | Canola | nucleus | 13.13 | 20.15 |
| CDX95898 | Canola | nucleus | 24.11 | 20.0 |
| CDY56439 | Canola | nucleus | 13.13 | 20.0 |
| CDX92102 | Canola | nucleus | 23.87 | 19.92 |
| CDY68249 | Canola | nucleus | 19.81 | 18.99 |
| CDX68392 | Canola | nucleus | 11.69 | 18.7 |
| CDY52133 | Canola | nucleus | 10.98 | 18.4 |
| CDX79963 | Canola | nucleus | 10.74 | 18.22 |
| CDY53674 | Canola | nucleus | 10.74 | 18.15 |
| CDX80940 | Canola | nucleus | 10.5 | 18.03 |
| CDX98816 | Canola | nucleus | 11.22 | 18.01 |
| CDX68803 | Canola | nucleus | 21.96 | 18.0 |
| VIT_07s0005g01010.t01 | Wine grape | nucleus | 22.91 | 17.98 |
| Os10t0463400-01 | Rice | nucleus | 14.32 | 17.6 |
| CDX72337 | Canola | nucleus | 21.96 | 17.59 |
| CDY13465 | Canola | nucleus | 21.72 | 17.57 |
| CDY61256 | Canola | nucleus | 11.46 | 17.52 |
| CDX82988 | Canola | nucleus | 10.74 | 17.37 |
| CDY08579 | Canola | nucleus | 10.02 | 17.36 |
| CDX82389 | Canola | nucleus | 25.06 | 17.24 |
| PGSC0003DMT400090747 | Potato | nucleus | 22.67 | 16.99 |
| CDY02794 | Canola | nucleus | 19.33 | 16.98 |
| CDY28869 | Canola | nucleus | 20.05 | 16.57 |
| CDX99104 | Canola | nucleus | 11.46 | 16.55 |
| CDY07410 | Canola | nucleus | 20.05 | 16.5 |
| CDY70103 | Canola | nucleus | 22.67 | 16.46 |
| CDY01838 | Canola | nucleus | 19.57 | 16.4 |
| Solyc12g099380.1.1 | Tomato | nucleus | 21.72 | 16.4 |
| CDX96070 | Canola | nucleus | 19.81 | 16.18 |
| CDY35371 | Canola | nucleus | 22.43 | 16.18 |
| CDY33920 | Canola | nucleus | 16.23 | 15.7 |
| CDX90546 | Canola | nucleus | 21.96 | 15.59 |
| CDY00969 | Canola | nucleus | 10.5 | 15.49 |
| CDY09718 | Canola | nucleus | 22.2 | 15.47 |
| CDY05641 | Canola | nucleus | 16.47 | 15.47 |
| CDY02793 | Canola | nucleus | 21.96 | 14.7 |
| CDY32725 | Canola | nucleus | 21.72 | 14.61 |
| CDY36273 | Canola | mitochondrion | 7.88 | 13.81 |
| CDX70016 | Canola | nucleus | 19.57 | 13.67 |
| CDX98997 | Canola | nucleus | 19.33 | 13.52 |
| CDY49965 | Canola | mitochondrion | 10.5 | 13.06 |
| CDX81041 | Canola | nucleus | 17.42 | 12.9 |
| CDX78284 | Canola | nucleus | 17.42 | 12.85 |
| CDY67763 | Canola | nucleus | 18.14 | 12.79 |
| CDY32209 | Canola | nucleus | 13.84 | 12.29 |
| CDY34423 | Canola | nucleus | 13.6 | 12.0 |
| CDY14053 | Canola | nucleus | 18.14 | 10.16 |
| CDX86925 | Canola | nucleus | 15.99 | 9.9 |
| CDY30695 | Canola | nucleus | 14.32 | 7.97 |
| TraesCS7A01G539600.1 | Wheat | nucleus | 3.82 | 4.73 |
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 1.43 | 1.81 |
| TraesCSU01G196300.1 | Wheat | nucleus, plastid | 1.43 | 1.81 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078CIS2 | EnsemblPlants:CDX76652 |
| ProteinID:CDX76652 | ProteinID:CDX76652.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00127124001 | InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| PFAM:PF00072 | PFAM:PF00249 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF23 |
| InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 |
| UniParc:UPI0004EE78EF | SEG:seg | : | : | : | : |
Description
BnaC08g32380D
Coordinates
chrLK031808:-:331100..332754
Molecular Weight (calculated)
48038.4 Da
IEP (calculated)
4.906
GRAVY (calculated)
-0.688
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVSSNILKE NSRDLLREEE PGDAEVEFPI DDEDEDFSIT SIRIVLVDSD PESLCLMKNL MTQFSYQVRD FKNGAEAIAF LMMSKHEIDL VIWDFHVPEI
101: NGLEALKTIG KEMDLPVVIM SHEHKKKTVM ESTKRGSCNF LVKPVSKEII AVLWQHVYRK RVSIYSVESN PEETVGLDQD DIDLYQTNSN CGEQTSSYQK
201: EDKNKKPRMT WTPELHQLFE KAVEKMGGVE QAVPKQILKC MQEEKDAEGL TRNNVASHLQ KYRLNSGKKS SMIQETREDS EWRNAGPNTA LTASKPLPNS
301: IFGLHTRVPY FANDQDARNG PMQYPSTNYF TMDNAHFMTN SFANLPYTDS FHQQQQFQHQ QYSHSSLQLP SVITKQEFPY VSAALENPDL IANKNSPYMD
401: WGDYLPEGGL SDFDKTNRY
101: NGLEALKTIG KEMDLPVVIM SHEHKKKTVM ESTKRGSCNF LVKPVSKEII AVLWQHVYRK RVSIYSVESN PEETVGLDQD DIDLYQTNSN CGEQTSSYQK
201: EDKNKKPRMT WTPELHQLFE KAVEKMGGVE QAVPKQILKC MQEEKDAEGL TRNNVASHLQ KYRLNSGKKS SMIQETREDS EWRNAGPNTA LTASKPLPNS
301: IFGLHTRVPY FANDQDARNG PMQYPSTNYF TMDNAHFMTN SFANLPYTDS FHQQQQFQHQ QYSHSSLQLP SVITKQEFPY VSAALENPDL IANKNSPYMD
401: WGDYLPEGGL SDFDKTNRY
001: MSVFSNILDE NSRNLRNEIP CDDGIASPIN DDDEEFLTKS NRVLLVGADS NSSLKNLMTQ YSYQVTKYES GEEAMAFLMK NKHEIDLVIW DFHMPDINGL
101: DALNIIGKQM DLPVVIMSHE YKKETVMESI KYGACDFLVK PVSKEVIAVL WRHVYRKRMS KSGLDKPGES GTVESDPDEY DDLEQDNLYE SNEEGSKNTC
201: DHKEEKSPTK KPRMQWTPEL HHKFEVAVEK MGSLEKAFPK TILKYMQEEL NVQGLTRNNV ASHLQKYRQS SKKTCTPQEP QEDFVWGNAG PDVTLAASKT
301: LLSSHATPSY LINNQAAPRG SYFMNNIPYP STSCLPVNNN NCFMTNPSTY IDQFQHQLQQ QQQHQQYQST LNSISAMLTK QESRHVPSSA MENSEPLMIY
401: NSNLPFGIDE CFPPAGFNIF DQIGHN
101: DALNIIGKQM DLPVVIMSHE YKKETVMESI KYGACDFLVK PVSKEVIAVL WRHVYRKRMS KSGLDKPGES GTVESDPDEY DDLEQDNLYE SNEEGSKNTC
201: DHKEEKSPTK KPRMQWTPEL HHKFEVAVEK MGSLEKAFPK TILKYMQEEL NVQGLTRNNV ASHLQKYRQS SKKTCTPQEP QEDFVWGNAG PDVTLAASKT
301: LLSSHATPSY LINNQAAPRG SYFMNNIPYP STSCLPVNNN NCFMTNPSTY IDQFQHQLQQ QQQHQQYQST LNSISAMLTK QESRHVPSSA MENSEPLMIY
401: NSNLPFGIDE CFPPAGFNIF DQIGHN
Arabidopsis Description
ARR20Putative two-component response regulator ARR20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZJ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.