Factsheet for VIT_07s0005g01010.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g01160.t01	Wine grape	cytosol	16.67	41.2
Bra037427.1-P	Field mustard	nucleus	15.54	30.4
CDX86245	Canola	nucleus	15.54	30.4
CDY56439	Canola	nucleus	15.54	30.18
GSMUA_Achr5P13050_001	Banana	cytosol	12.17	28.38
VIT_05s0077g01480.t01	Wine grape	nucleus	34.08	28.26
AT5G49240.1	Thale cress	cytoskeleton, cytosol, nucleus	15.17	27.74
PGSC0003DMT400090747	Potato	nucleus	27.72	26.48
Zm00001d032784_P001	Maize	nucleus	16.67	26.41
KXG38401	Sorghum	nucleus	17.04	26.22
Solyc12g099380.1.1	Tomato	nucleus	24.91	23.96
CDY16482	Canola	nucleus	19.66	23.86
VIT_01s0011g05830.t01	Wine grape	nucleus	31.09	23.75
AT3G62670.1	Thale cress	nucleus	18.73	23.47
CDX77263	Canola	nucleus	19.66	23.33
VIT_04s0008g05900.t01	Wine grape	nucleus	30.15	23.23
VIT_01s0010g02230.t01	Wine grape	nucleus	25.84	23.23
VIT_17s0000g10110.t01	Wine grape	nucleus	19.66	23.23
Bra014172.1-P	Field mustard	nucleus	19.48	23.16
CDX76652	Canola	nucleus	17.98	22.91
Bra041027.1-P	Field mustard	nucleus	17.98	22.86
VIT_17s0000g10100.t01	Wine grape	nucleus	24.34	22.81
VIT_11s0206g00060.t01	Wine grape	nucleus	29.4	22.66
CDY11437	Canola	nucleus	17.79	22.62
CDY33920	Canola	nucleus	17.04	21.02
Bra020652.1-P	Field mustard	nucleus	17.23	20.86
Os10t0463400-01	Rice	nucleus	12.92	20.23
Bra032275.1-P	Field mustard	nucleus	19.1	20.2
CDY29358	Canola	nucleus	19.1	20.2
CDY05641	Canola	nucleus	16.67	19.96
CDY04335	Canola	nucleus	18.91	19.13
VIT_06s0004g05120.t01	Wine grape	nucleus	11.05	18.97
VIT_16s0100g00420.t01	Wine grape	nucleus	19.48	17.57
VIT_08s0040g00900.t01	Wine grape	nucleus	9.74	16.99
KRH60425	Soybean	nucleus	11.24	16.67
AT1G49190.2	Thale cress	nucleus	19.29	16.56
VIT_16s0100g00430.t01	Wine grape	nucleus	13.86	14.89
TraesCS7A01G539600.1	Wheat	nucleus	5.62	8.88
TraesCSU01G196300.1	Wheat	nucleus, plastid	2.25	3.63
TraesCSU01G179800.1	Wheat	nucleus, plastid	2.25	3.63

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	ProteinID:CCB59992	ProteinID:CCB59992.1
InterPro:CheY-like_superfamily	UniProt:F6HZ77	EMBL:FN596502	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PFscan:PS50110	PFscan:PS51294
PANTHER:PTHR43874	PANTHER:PTHR43874:SF23	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI000210AA7A	ArrayExpress:VIT_07s0005g01010	EnsemblPlantsGene:VIT_07s0005g01010	EnsemblPlants:VIT_07s0005g01010.t01

Description

No Description!

Coordinates

chr7:+:3581296..3584505

Molecular Weight (calculated)

59973.0 Da

IEP (calculated)

6.653

GRAVY (calculated)

-0.446

Length

534 amino acids

Sequence
(BLAST)

001: MSVTAAVPLQ FPEGIRVLAV DDDQTCLQIM GRMLERCMYK VTKCRNAEEA LSLLREDSSR FDIVLSDLHM PDISGLKLLE IIGLEMDMPV VMMSSDEKRE
101: TIMKGIIHGA CDYWVKPVRM DAIQLVWQHV IRKRRNGLKE MEHAMEDDVE GGNEEGSRSM KRKKDREDEG ESRNAMPTTV KKPRMVWTPA LHQQFVAAVN
201: QLGYSKAVPK KILEQMNLPG LTRENVASHL QVMEKIFSRK IYCYCLVKDT DNYSYMVQKF RLYLSRVSEI SQGPEKTYMN PASLNGCNPQ LNVVGEVPLQ
301: GLTREGTSRT PMAFVDQRNL FHYGVGQQAC NSSKQAKLLH EVPANMLQQP AQMYRSLDFQ VSEGTPRSLN LPAANDDSVY GSQSSFSTMQ MAQTPYGMPM
401: LNEISGHQHF GHHPLSNQIL SNDIEAQALR TVGNPIESNA AACYPLASPM VDFSKDHSHG FHLEMNAIYG NASSVGQGMV SLGEEYGYRN PENIAQPGNN
501: LLVDDSFRMK PESMPRPGCK SLSFGQHFDH GFMS

Best Arabidopsis Sequence Match ( AT2G01760.1 )
(BLAST)

001: MPINDQFPSG LRILVVDDDT SCLFILEKML LRLMYQVTIC SQADVALTIL RERKDSFDLV LSDVHMPGMN GYNLLQQVGL LEMDLPVIMM SVDGRTTTVM
101: TGINHGACDY LIKPIRPEEL KNIWQHVVRR KCVMKKELRS SQALEDNKNS GSLETVVVSV SECSEESLMK CRNKKKKKKR SVDRDDNEDD LLLDPGNSKK
201: SRVVWSIELH QQFVNAVNKL GIDKAVPKRI LELMNVPGLS RENVASHLQK FRLYLKRLSG EASQSNDSES TKRYENIQAL VSSGQLHPQT LAALFGQPID
301: NHHSASFGVW IPNDNLGRSQ NEHFSVDVSS ASNRPVSVAV HGLSSSANFR QRGDVNNNRI RQGYGSNVNE ESWILERSSR QR

Arabidopsis Description

ARR14response regulator 14 [Source:TAIR;Acc:AT2G01760]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.