Factsheet for VIT_05s0077g01480.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50777	Soybean	nucleus	75.78	71.87
KRH02311	Soybean	nucleus	74.22	70.61
VIT_11s0052g01160.t01	Wine grape	cytosol	15.68	46.76
GSMUA_Achr5P16510_001	Banana	cytosol, nucleus, plastid	13.51	40.28
VIT_01s0011g05830.t01	Wine grape	nucleus	41.46	38.2
VIT_07s0005g01010.t01	Wine grape	nucleus	28.26	34.08
VIT_11s0206g00060.t01	Wine grape	nucleus	35.25	32.76
VIT_17s0000g10100.t01	Wine grape	nucleus	27.95	31.58
VIT_01s0010g02230.t01	Wine grape	nucleus	29.04	31.48
VIT_04s0008g05900.t01	Wine grape	nucleus	33.85	31.46
VIT_17s0000g10110.t01	Wine grape	nucleus	21.27	30.31
VIT_06s0004g05120.t01	Wine grape	nucleus	12.89	26.69
VIT_08s0040g00900.t01	Wine grape	nucleus	11.02	23.2
VIT_16s0100g00420.t01	Wine grape	nucleus	21.27	23.14
VIT_16s0100g00430.t01	Wine grape	nucleus	14.75	19.11

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	ProteinID:ACO88949	ProteinID:ACO88949.1
ProteinID:CCB47998	ProteinID:CCB47998.1	InterPro:CheY-like_superfamily	UniProt:F6H6U1	EMBL:FJ822988	EMBL:FN595246
GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874
PANTHER:PTHR43874:SF23	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGR:TC58467	TIGR:TC68013	TIGRFAMs:TIGR01557	UniParc:UPI0002109826	ArrayExpress:VIT_05s0077g01480
EnsemblPlantsGene:VIT_05s0077g01480	EnsemblPlants:VIT_05s0077g01480.t01	unigene:Vvi.8548	SEG:seg	:	:

Description

Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:F6H6U1]

Coordinates

chr5:-:1183944..1188170

Molecular Weight (calculated)

70458.5 Da

IEP (calculated)

5.994

GRAVY (calculated)

-0.446

Length

644 amino acids

Sequence
(BLAST)

001: MNLGSGQGSM STASSSGAWK AGDVVPDQFP AGLRVLVVDD DPTCLMILEK MLRTCLYEVT KCNRAETALS LLRGNKSGFD IVISDVHMPD MDGFKLLEHI
101: GLEMDLPVIM MSADDGKHVV MKGVTHGACD YLIKPVRIEA LKNIWQHVVR KRKNEWKDLE QSGSVEDGDR QQKPSEDVDY SSSANEGNWK NSKRRKDEED
201: DAEERDDTST LKKPRVVWSV ELHQQFVAAV NQLGIDKAVP KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHQNG LNNSFMGPQE ATFGSISSLN
301: GLDLQTLAVA GQLPAQSLAT LQAAGLGRST GKSGLPMPLV DQRNLFSFEA PKFRYGEGQQ QQQQLSNSSK QMNLLHGIPT TMEPKQLATL RHSAQSFGSI
401: NMQVNAHGND SSSLLMQMAQ PHSRAQILNE TTGNHVSRIA SSMGQPVLSN GIAGGLLTRN VIVENGRGAG FNPVSQGPSV VEFPMNHTAE LPGNSFPLGT
501: NPGISSIQSK GLLEEVSSEI KGSRGFVPSY DIFNELHQPK SQDWELQNVG LTFNASQHAN SIPGNLGSEH GNTHNISQHL NTLVDSSSRV KTEKILDPCC
601: EITPFPEHYV QEDLMSALLK QQEGIGPVEG EFDFDGYSMD NIPV

Best Arabidopsis Sequence Match ( AT3G16857.2 )
(BLAST)

001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV

Arabidopsis Description

ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.