CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50777	Soybean	nucleus	95.72	95.43
KRH12005	Soybean	nucleus	77.25	77.83
KRH37035	Soybean	nucleus	75.78	76.23
VIT_05s0077g01480.t01	Wine grape	nucleus	70.61	74.22
KRH16193	Soybean	nucleus	14.48	48.51
KRH33116	Soybean	cytosol	18.32	43.51
KRH60428	Soybean	nucleus	15.07	41.46
KRG97483	Soybean	nucleus	26.44	39.34
GSMUA_Achr5P16510_001	Banana	cytosol, nucleus, plastid	12.41	38.89
KRH70359	Soybean	nucleus	34.42	36.81
KRH49669	Soybean	nucleus	33.83	36.18
KRH25649	Soybean	cytosol	11.23	33.48
KRH12938	Soybean	nucleus	33.38	32.24
KRH37916	Soybean	nucleus	33.09	32.09
KRH31403	Soybean	nucleus	27.92	31.29
KRH61694	Soybean	nucleus	29.99	30.95
KRH15779	Soybean	nucleus	30.43	30.65
KRH05273	Soybean	nucleus	29.99	30.43
KRG93917	Soybean	cytosol	16.4	30.33
KRH58726	Soybean	endoplasmic reticulum, extracellular	28.36	30.24
KRH41726	Soybean	nucleus	17.58	29.68
KRH58247	Soybean	cytosol	13.15	29.37
KRH03086	Soybean	nucleus	29.25	29.07
KRH52361	Soybean	nucleus	29.84	29.02
KRH20086	Soybean	nucleus	29.1	28.97
KRH42619	Soybean	nucleus	21.27	28.24
KRH41727	Soybean	nucleus	20.24	27.85
KRG93902	Soybean	nucleus	15.36	27.01
KRH71692	Soybean	nucleus	10.19	26.54
KRH24748	Soybean	nucleus	11.67	25.82
KRH29751	Soybean	nucleus	11.82	24.77
KRG95053	Soybean	nucleus	10.78	23.4
KRH60425	Soybean	nucleus	12.26	23.06
KRH66705	Soybean	nucleus	10.78	22.67
KRH76596	Soybean	mitochondrion	3.84	21.49
KRH09142	Soybean	nucleus	20.53	20.78
KRH38615	Soybean	nucleus	14.62	18.75

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100781102	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EMBL:ACUP02010302
InterPro:CheY-like_superfamily	EnsemblPlantsGene:GLYMA_17G030600	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:I1MRN2	InterPro:IPR001789
InterPro:IPR017930	EnsemblPlants:KRH02311	ProteinID:KRH02311	ProteinID:KRH02311.1	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874
PANTHER:PTHR43874:SF23	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI000233F0A7	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:+:2248769..2253279

Molecular Weight (calculated)

73859.6 Da

IEP (calculated)

6.147

GRAVY (calculated)

-0.460

Length

677 amino acids

Sequence
(BLAST)

001: MNLSNGKGSM STLTASVVMK SGDAVSDQFP AGLRVLVVDD DPTCLMILEK MLRTCLYEVT KCNRAETALS LLRENKNGFD IVISDVHMPD MDGFKLLEHI
101: GLEMDLPVIM MSADDGKSVV MKGVTHGACD YLIKPVRIEA LKNIWQHVVR KRKNEWKDAE QSGSAEEGDR HPKASDEADY SSSANEGSWR NSKKRRDEEE
201: EAEDRDDTST LKKPRVVWSV ELHQQFVAAV DQLGIDKAVP KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHQNN LNNSFLGPQE ATFGTISSIN
301: GIDLQTLAVA GQLPAQSLAT LQAAGLGRST AKAGVPIPLM DQRNLFSFEN PRLRFGEGQP QHLSTSKPMN LLHGIPTNME PKQLANLHQS TQSIGGLNMR
401: VNASATQGNP ILMQMAQSQP RGQMLSENTG PRVPRLPSSL GQPTVSNGIS NGLLGRNGIA GNNRGPAYNP VPPSSSLLSF PMNQTSEMSV NNSFPIGTTP
501: GISSITTKGS FQEEVTSGIK GSSGFPSYDI FNELHHQKSH DLEITNPGLT YNASHHVNPL QGNIDVAPSV LVHQGFSSTQ QTGQSRDGAL IGKAMFSMGE
601: GLEQNNLQNA NFNPLLVDNS IRIKAERIPD ASSQTNLFPE HYGQEDLMTA LLKQQEGMGP AENEFEFDGY SLDNIPV

Best Arabidopsis Sequence Match ( AT3G16857.2 )
(BLAST)

001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV

Arabidopsis Description

ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.