CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12938	Soybean	nucleus	93.7	93.3
KRH16193	Soybean	nucleus	17.77	61.39
KRH03086	Soybean	nucleus	57.02	58.44
KRH33116	Soybean	cytosol	23.5	57.54
VIT_11s0206g00060.t01	Wine grape	nucleus	56.45	56.85
KRH20086	Soybean	nucleus	54.3	55.74
Solyc07g005140.2.1	Tomato	nucleus	50.0	52.48
Solyc12g010330.1.1	Tomato	nucleus	52.29	51.55
PGSC0003DMT400020233	Potato	nucleus	52.01	51.34
KRH61694	Soybean	nucleus	43.41	46.19
PGSC0003DMT400008290	Potato	nucleus	50.14	45.28
KRH05273	Soybean	nucleus	41.98	43.93
KRH52361	Soybean	nucleus	43.27	43.39
KRH15779	Soybean	nucleus	41.55	43.15
KRG97483	Soybean	nucleus	25.64	39.34
KRH60428	Soybean	nucleus	13.32	37.8
KRH02311	Soybean	nucleus	32.09	33.09
KRH50777	Soybean	nucleus	31.81	32.7
KRH12005	Soybean	nucleus	31.09	32.29
KRH31403	Soybean	nucleus	27.94	32.28
KRH37035	Soybean	nucleus	31.09	32.24
KRH25649	Soybean	cytosol	10.46	32.16
KRH49669	Soybean	nucleus	29.08	32.07
KRH70359	Soybean	nucleus	28.65	31.6
KRH58726	Soybean	endoplasmic reticulum, extracellular	27.79	30.55
KRH42619	Soybean	nucleus	21.92	30.0
KRG93917	Soybean	cytosol	14.76	28.14
KRH41726	Soybean	nucleus	16.05	27.93
KRH41727	Soybean	nucleus	18.62	26.42
KRH58247	Soybean	cytosol	11.32	26.07
KRH71692	Soybean	nucleus	9.31	25.0
KRH24748	Soybean	nucleus	10.89	24.84
KRH76596	Soybean	mitochondrion	4.3	24.79
KRG95053	Soybean	nucleus	11.03	24.68
KRG93902	Soybean	nucleus	13.61	24.68
KRH29751	Soybean	nucleus	10.89	23.53
KRH60425	Soybean	nucleus	12.03	23.33
KRH66705	Soybean	nucleus	10.74	23.29
KRH09142	Soybean	nucleus	18.77	19.58
KRH38615	Soybean	nucleus	14.76	19.51

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100807822	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EMBL:ACUP02005560
InterPro:CheY-like_superfamily	EnsemblPlantsGene:GLYMA_09G098600	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:I1L2E2	InterPro:IPR001789
InterPro:IPR017930	EnsemblPlants:KRH37916	ProteinID:KRH37916	ProteinID:KRH37916.1	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874
PANTHER:PTHR43874:SF8	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI00023CB034	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:17303834..17308762

Molecular Weight (calculated)

76226.4 Da

IEP (calculated)

5.654

GRAVY (calculated)

-0.502

Length

698 amino acids

Sequence
(BLAST)

001: MAVENQREDG GCDRFPVGMR VLAVDDDPIC LKVLENLLRK CQYHVTTTNQ AVEALTMLRE NRNKFDLVIS DVNMPDIDGF KLLELVGLEM DLPVIMLSAH
101: GDTKLVMKGV THGACDYLLK PVRIEELKNI WQHVVRRKNF DSRDQNKASN EEKAPNFAGG GSQGLRSENS ADQNKRLGKK RKDQSDEEEE GGEENEDDED
201: PSAQKKARVV WSVELHRKFV AAVNQLGLDK AVPKKILDLM NVEGLTRENV ASHLQKYRLY LKKAAQQANM VAALGGSDSY LRIGSIDGYG DFCTSSGSGR
301: ITNATLPSYA STGIFSRLNS PAALNMRGIS SSALIRPVQS QNINSSLNTL GNIQPSIFPA NQSSSLLQGI PTSIELNQSK QRNCTTGISQ LSQVDSSGFT
401: VASGFPDHRA TVNGPNNSLP CVSNNHIMLQ GNPQTHGPGA FSNQSSVRAA SLCAESFDVG LCGSSNLLDH NRCNDNWQNA AQLSKFPANS LPLCEAFSND
501: QLPPTSINDS NSSTHIGNNS PVDFSSRMGI SVPLEDTRNE LRCQEGLIGN IVQPSSYTPR QRWEEHKLDY NQNMSCPFNS VNSHASSSGV TSSMGHVLNQ
601: NNTICSNRVD ASSLVGQLNG ASPSISRCTE VEKFSSDIRL KPNEAYILEQ MKSQDGFMQN TFGTLDDIMG VMVKREQNES TLLDGEMGFD AYPVGSCN

Best Arabidopsis Sequence Match ( AT5G58080.1 )
(BLAST)

001: MEFGSTEDGR HDKFPVGMRV LAVDDNPTCL RKLEELLLRC KYHVTKTMES RKALEMLREN SNMFDLVISD VEMPDTDGFK LLEIGLEMDL PVIMLSAHSD
101: YDSVMKGIIH GACDYLVKPV GLKELQNIWH HVVKKNIKSY AKLLPPSESD SVPSASRKRK DKVNDSGDED DSDREEDDGE GSEQDGDGSG TRKKPRVVWS
201: QELHQKFVSA VQQLGLDKAV PKKILDLMSI EGLTRENVAS HLQKYRLYLK KIDEGQQQNM TPDAFGTRDS SYFQMAQLDG LRDFTAARQI PSSGLLSRSH
301: LTKLQPPMYS SINLQGMNSS SFIQQGHHQN SSNSANPFGT YHSTLSPRIQ NVNLFQRTSS PLEPLQFPRS KSYIGDFKGL GDRAIGGSFL DTCMPFGSSS
401: TSLPSASTNP LMLQANYTQP LHIASDGIQP CIEGTPSNSA SPNISFQGLS RFPGHSWQGN LNTTRFPPSS LPLNLAFLPD QVTCAGNNLG DCTSLVSAEN
501: PGGEMQCDPQ LLGGFMQNVN PLGGQKWEQQ NCTMLNNPFG NIEYPLPADN MVFRDNNSTR SKGLDESLMN PIDNSQEYVG KATTMLDPEM KSGKPENDNQ
601: HDVFDDIMNE MMKQEENNGM VPVATRFGFD SFPPP

Arabidopsis Description

ARR18Two-component response regulator ARR18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGT7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.