CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52361	Soybean	nucleus	90.7	85.49
KRH05273	Soybean	nucleus	66.31	65.22
KRH15779	Soybean	nucleus	64.48	62.95
KRH16193	Soybean	nucleus	17.23	55.94
KRH33116	Soybean	cytosol	23.78	54.74
VIT_04s0008g05900.t01	Wine grape	nucleus	56.71	53.68
KRH37916	Soybean	nucleus	46.19	43.41
Solyc07g005140.2.1	Tomato	nucleus	43.6	43.01
KRH12938	Soybean	nucleus	45.58	42.65
GSMUA_Achr11P...	Banana	nucleus	39.94	41.46
Solyc12g010330.1.1	Tomato	nucleus	43.9	40.68
GSMUA_Achr2P05130_001	Banana	nucleus	39.63	40.37
PGSC0003DMT400020233	Potato	nucleus	43.45	40.31
GSMUA_Achr10P...	Banana	nucleus	39.94	40.12
KRH60428	Soybean	nucleus	14.48	38.62
KRG97483	Soybean	nucleus	26.37	38.02
KRH20086	Soybean	nucleus	38.72	37.35
KRH03086	Soybean	nucleus	38.57	37.15
PGSC0003DMT400008290	Potato	nucleus	43.45	36.87
KRH25649	Soybean	cytosol	11.43	33.04
KRH50777	Soybean	nucleus	31.1	30.04
KRH02311	Soybean	nucleus	30.95	29.99
KRH31403	Soybean	nucleus	27.44	29.8
KRH12005	Soybean	nucleus	30.34	29.61
KRH70359	Soybean	nucleus	28.51	29.54
KRH49669	Soybean	nucleus	28.35	29.38
KRH37035	Soybean	nucleus	29.88	29.12
KRG93917	Soybean	cytosol	15.85	28.42
KRH41726	Soybean	nucleus	17.23	28.18
KRH58247	Soybean	cytosol	12.96	28.05
KRH58726	Soybean	endoplasmic reticulum, extracellular	25.91	26.77
KRH76596	Soybean	mitochondrion	4.88	26.45
KRH42619	Soybean	nucleus	20.27	26.08
KRG93902	Soybean	nucleus	15.09	25.71
KRH71692	Soybean	nucleus	10.06	25.38
Os06t0647200-02	Rice	nucleus	26.37	25.07
KRH41727	Soybean	nucleus	18.29	24.39
KRH24748	Soybean	nucleus	10.82	23.2
KRH60425	Soybean	nucleus	12.35	22.5
KRH29751	Soybean	nucleus	10.82	21.98
KRG95053	Soybean	nucleus	10.37	21.79
KRH66705	Soybean	nucleus	10.21	20.81
KRH09142	Soybean	nucleus	18.9	18.54
KRH38615	Soybean	nucleus	14.18	17.61

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100793913	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EMBL:ACUP02002181
InterPro:CheY-like_superfamily	ncoils:Coil	EnsemblPlantsGene:GLYMA_04G062500	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:I1JU86
InterPro:IPR001789	InterPro:IPR017930	EnsemblPlants:KRH61694	ProteinID:KRH61694	ProteinID:KRH61694.1	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294
PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689
SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0002339C2A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:5158262..5163060

Molecular Weight (calculated)

72497.7 Da

IEP (calculated)

6.848

GRAVY (calculated)

-0.552

Length

656 amino acids

Sequence
(BLAST)

001: MTVEKKRNDS GDEFPVGMRV LAVDDDPTCL LVLKTLLQRC QYHVTTTNQA IKALALLREH KDKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG
101: DTKMVMKGIS HGACDYLLKP VRMEELKNIW QHVIRRKKFD SKEKNKTSNL DKPTSNSGNG LGSSGTGNSD QNEKLTKKRK DQDEDEDEDQ ENDLDNEDPS
201: AQKKPRVVWS VDLHRKFVAA VNQLGIDKAV PKKILDLMNV EKLTRENVAS HLQKYRLYLK RISCVANQQA NMVAALGVAD PSYLRMSSVS GVGHVQTLSG
301: SGQLHNNNFR SFPPSGIINR LNTPAGLNVH GFPSGVLQLS QSQNLNNAND HHKFQSVIVP VNQNGVQGMT VSVGLDQLQN NKVVMSVQNL TTVFDAKTTF
401: PIPNKLPDPR PKITNSVSHT SDVHFSNNAL MLEPRPQGSQ GSVRIGTLSS SVASQHSEFS LSLLDQGRYS DNWTSAVQPS VIQTNFFPPS ECFRQTNIPP
501: ADNMASVPLQ GGNLSGPSIT SLSRQSHDSM TEMHSEGMTF TNRPGHTSSN VPFQGWDDHN QDATHHSNIM SINSLTPVNG AAVQAGHAAT NSVLHRNLDF
601: NYCDPLQMKH EGFVELTDET LLKQHQGNTM DQQKSQENHF SNNLGSLEDL VSSMMK

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.