CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15779	Soybean	nucleus	90.25	89.58
KRH61694	Soybean	nucleus	65.22	66.31
KRH52361	Soybean	nucleus	67.62	64.8
KRH16193	Soybean	nucleus	17.09	56.44
KRH33116	Soybean	cytosol	23.09	54.04
VIT_04s0008g05900.t01	Wine grape	nucleus	55.32	53.25
Solyc07g005140.2.1	Tomato	nucleus	42.13	42.26
KRH37916	Soybean	nucleus	43.93	41.98
KRH12938	Soybean	nucleus	42.73	40.66
GSMUA_Achr2P05130_001	Banana	nucleus	39.13	40.53
GSMUA_Achr10P...	Banana	nucleus	39.28	40.12
Solyc12g010330.1.1	Tomato	nucleus	42.58	40.11
PGSC0003DMT400020233	Potato	nucleus	42.43	40.03
GSMUA_Achr11P...	Banana	nucleus	36.28	38.29
KRH60428	Soybean	nucleus	14.09	38.21
KRH03086	Soybean	nucleus	38.23	37.44
KRH20086	Soybean	nucleus	37.78	37.06
KRG97483	Soybean	nucleus	24.74	36.26
PGSC0003DMT400008290	Potato	nucleus	41.98	36.22
KRH25649	Soybean	cytosol	10.94	32.16
KRH50777	Soybean	nucleus	30.88	30.34
KRH02311	Soybean	nucleus	30.43	29.99
KRH70359	Soybean	nucleus	28.34	29.86
KRH37035	Soybean	nucleus	29.84	29.57
KRH49669	Soybean	nucleus	28.04	29.54
KRH12005	Soybean	nucleus	29.54	29.32
KRH31403	Soybean	nucleus	26.54	29.3
KRG93917	Soybean	cytosol	15.89	28.96
KRH58247	Soybean	cytosol	12.89	28.38
KRH41726	Soybean	nucleus	16.49	27.43
KRH58726	Soybean	endoplasmic reticulum, extracellular	25.94	27.24
KRH42619	Soybean	nucleus	20.39	26.67
KRH76596	Soybean	mitochondrion	4.8	26.45
KRG93902	Soybean	nucleus	14.99	25.97
Os06t0647200-02	Rice	nucleus	25.64	24.78
KRH71692	Soybean	nucleus	9.45	24.23
KRH41727	Soybean	nucleus	17.54	23.78
KRH24748	Soybean	nucleus	10.49	22.88
KRH29751	Soybean	nucleus	10.64	21.98
KRG95053	Soybean	nucleus	10.19	21.79
KRH66705	Soybean	nucleus	10.04	20.81
KRH60425	Soybean	nucleus	11.09	20.56
KRH09142	Soybean	nucleus	18.44	18.39
KRH38615	Soybean	nucleus	13.49	17.05

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100777171	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EMBL:ACUP02010720
InterPro:CheY-like_superfamily	EnsemblPlantsGene:GLYMA_17G217100	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	UniProt:I1MWY8	InterPro:IPR001789
InterPro:IPR017930	EnsemblPlants:KRH05273	ProteinID:KRH05273	ProteinID:KRH05273.1	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874
PANTHER:PTHR43874:SF7	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI000233E0A0	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:+:36599289..36605544

Molecular Weight (calculated)

73695.7 Da

IEP (calculated)

6.329

GRAVY (calculated)

-0.591

Length

667 amino acids

Sequence
(BLAST)

001: MTVVENHTMD DLRDQFPIGM RVLAVDDDST CLMVLETLLR RCQYHVTTTK NAITALNLLR ENKTMFDLVI SDVHMPDMDG FKLLELVGLE MDLPVIMLSV
101: NDDPKMVMKG ITHGACDYLL KPVRIEELQN IWQHVIRRKK IDSKEQNKTS DYDKTNSDSG NGRGSAATGN SDQNGKPSKK RKDQDEDDDE ENDTDHDNED
201: PSTQKKPRVV WSVELHRKFV SAVNLLGIDK AVPKKILDLM NDEKLTRENV ASHLQKYRLY LKRISCGANR QANMVAALGT ADSSYLRMGS LSGVGHLQTL
301: TGPQQFHNNA FRPFPPGGMI GRLNTSVGLN NHGLSSSEAL QLSHAQNLNN SINDPLKFQS SIACGNQNAI QGMPMSIGLD QLQHNKGVSV SVGPIQNMSP
401: LIDARPTFAV SNRLSDQIPK VTMGCSPSPV LDVSNNALVL KADSENTQGR GVYENLTSVA SQHSQFSLPL LGHGRCSDIW SSPMRSSGTN SYPPSETLQG
501: GNLSGASSIT SLSNQSHDSQ TDMHSQGLIF TNNSGQISNN VPFLGWDDHN HDSSYHSNVI GNSIDSLIDP EGHTSINSTY NRNLDFNFCD PLQMKHDGIM
601: GLSDENSLKQ QHRYIMNQQK SQNSRAPNNI GSLEDFVSSM MKQKQDKVKF LDGSYLCNNN YPDGTSM

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.