CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37916	Soybean	nucleus	93.3	93.7
KRH16193	Soybean	nucleus	17.97	62.38
KRH33116	Soybean	cytosol	23.54	57.89
KRH03086	Soybean	nucleus	56.21	57.86
VIT_11s0206g00060.t01	Wine grape	nucleus	56.92	57.58
KRH20086	Soybean	nucleus	53.35	55.0
Solyc07g005140.2.1	Tomato	nucleus	49.07	51.73
Solyc12g010330.1.1	Tomato	nucleus	52.21	51.69
PGSC0003DMT400020233	Potato	nucleus	51.93	51.49
KRH61694	Soybean	nucleus	42.65	45.58
PGSC0003DMT400008290	Potato	nucleus	49.36	44.76
KRH52361	Soybean	nucleus	42.51	42.82
KRH05273	Soybean	nucleus	40.66	42.73
KRH15779	Soybean	nucleus	40.66	42.41
KRG97483	Soybean	nucleus	25.25	38.9
KRH60428	Soybean	nucleus	13.55	38.62
KRH02311	Soybean	nucleus	32.24	33.38
KRH50777	Soybean	nucleus	31.81	32.84
KRH12005	Soybean	nucleus	31.24	32.59
KRH37035	Soybean	nucleus	31.1	32.39
KRH49669	Soybean	nucleus	29.1	32.23
KRH25649	Soybean	cytosol	10.41	32.16
KRH31403	Soybean	nucleus	27.39	31.79
KRH70359	Soybean	nucleus	28.67	31.75
KRH58726	Soybean	endoplasmic reticulum, extracellular	27.25	30.08
KRH42619	Soybean	nucleus	21.4	29.41
KRG93917	Soybean	cytosol	14.84	28.42
KRH41726	Soybean	nucleus	15.98	27.93
KRH58247	Soybean	cytosol	11.7	27.06
KRH41727	Soybean	nucleus	18.54	26.42
KRG95053	Soybean	nucleus	11.41	25.64
KRH76596	Soybean	mitochondrion	4.42	25.62
KRG93902	Soybean	nucleus	13.69	24.94
KRH71692	Soybean	nucleus	9.13	24.62
KRH24748	Soybean	nucleus	10.7	24.51
KRH66705	Soybean	nucleus	11.13	24.22
KRH60425	Soybean	nucleus	12.13	23.61
KRH29751	Soybean	nucleus	10.7	23.22
KRH38615	Soybean	nucleus	14.84	19.7
KRH09142	Soybean	nucleus	18.69	19.58

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100776075	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	UniProt:A0A0R0G3R5
EMBL:ACUP02009485	InterPro:CheY-like_superfamily	EnsemblPlantsGene:GLYMA_15G206200	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789
InterPro:IPR017930	EnsemblPlants:KRH12938	ProteinID:KRH12938	ProteinID:KRH12938.1	InterPro:Myb_dom	InterPro:Myb_dom_plants
PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874
PANTHER:PTHR43874:SF8	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0006ED64C5	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:-:28958236..28963375

Molecular Weight (calculated)

76860.5 Da

IEP (calculated)

6.137

GRAVY (calculated)

-0.511

Length

701 amino acids

Sequence
(BLAST)

001: MAVEKQREDE GCDRFPVGMR VLAVDDDPIC LKVLENLLRK CQYHVTTTNQ AVEALKMLRE NRNKFDLVIS DVNMPDIDGF KLLELVGLEM DLPVIMLSAH
101: GDTKLVMKGV THGACDYLLK PVRIEELKNI WQHVVRRKNF DSRDQNKASN EEKAPNIAGE GSQGLRSENS ADQNKRLGKK RKDQSEEEEE DGEENGDDED
201: PSAQKKPRVV WSVELHRKFV AAVNQLGLDK AVPKKILDLM NVEGLTRENV ASHLQKYRLY LKKAAQQANM VAALGGSDSY LRMGSIDGYG DFCTSSGSGR
301: ITNTTSPSYA STGIFSRLNS PAALNMRAIS SSALIRPVQS QNINCSLNTL GNIQPSVFPA NHSSSLLQGI PTSIELNQSK QSNCTTGISQ LSQVDSSGFA
401: VASGFPDSRA TVNGPNNSLP CVSNNHIMLQ GNPQQMHGPG AFRNQSSVRA ASLCAESFDA GLCSSSNLLD YNRCNENWQN AAQLSKFPAH SLPLCEAFSN
501: DQLPPTRINV SNSRTHIVNS PVDFSSRMGI SVPLEDTRNE LACQEGLIGN IVKPSSYTPQ QRWEEHKLDY NQNVGHSFNP VNSHASSSGV KSSMGHGLNQ
601: NNTICSNRVD ASLVGQLNGA SPSISRCTEV EKFSSDIRLK PNEAYILEQM KSQDGFMQNT FGTLDDIMGA MVKRTTMQEQ NELTLLDGEM GFDAYPVGSC
701: N

Best Arabidopsis Sequence Match ( AT5G58080.1 )
(BLAST)

001: MEFGSTEDGR HDKFPVGMRV LAVDDNPTCL RKLEELLLRC KYHVTKTMES RKALEMLREN SNMFDLVISD VEMPDTDGFK LLEIGLEMDL PVIMLSAHSD
101: YDSVMKGIIH GACDYLVKPV GLKELQNIWH HVVKKNIKSY AKLLPPSESD SVPSASRKRK DKVNDSGDED DSDREEDDGE GSEQDGDGSG TRKKPRVVWS
201: QELHQKFVSA VQQLGLDKAV PKKILDLMSI EGLTRENVAS HLQKYRLYLK KIDEGQQQNM TPDAFGTRDS SYFQMAQLDG LRDFTAARQI PSSGLLSRSH
301: LTKLQPPMYS SINLQGMNSS SFIQQGHHQN SSNSANPFGT YHSTLSPRIQ NVNLFQRTSS PLEPLQFPRS KSYIGDFKGL GDRAIGGSFL DTCMPFGSSS
401: TSLPSASTNP LMLQANYTQP LHIASDGIQP CIEGTPSNSA SPNISFQGLS RFPGHSWQGN LNTTRFPPSS LPLNLAFLPD QVTCAGNNLG DCTSLVSAEN
501: PGGEMQCDPQ LLGGFMQNVN PLGGQKWEQQ NCTMLNNPFG NIEYPLPADN MVFRDNNSTR SKGLDESLMN PIDNSQEYVG KATTMLDPEM KSGKPENDNQ
601: HDVFDDIMNE MMKQEENNGM VPVATRFGFD SFPPP

Arabidopsis Description

ARR18Two-component response regulator ARR18 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGT7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.