Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95053 | Soybean | nucleus | 70.0 | 58.33 |
| KRH66705 | Soybean | nucleus | 67.69 | 54.66 |
| Bra004593.1-P | Field mustard | nucleus | 49.23 | 51.82 |
| CDX79963 | Canola | nucleus | 49.23 | 51.82 |
| AT2G40970.1 | Thale cress | nucleus | 49.23 | 51.61 |
| CDX80940 | Canola | nucleus | 48.08 | 51.23 |
| CDY53674 | Canola | nucleus | 48.85 | 51.21 |
| CDY52133 | Canola | nucleus | 49.23 | 51.2 |
| Bra005837.1-P | Field mustard | nucleus | 48.85 | 50.6 |
| GSMUA_Achr11P... | Banana | nucleus | 58.08 | 49.84 |
| GSMUA_Achr8P05880_001 | Banana | nucleus | 56.54 | 46.67 |
| GSMUA_Achr5P27500_001 | Banana | nucleus | 50.38 | 46.13 |
| TraesCS1D01G257700.1 | Wheat | nucleus | 52.31 | 44.01 |
| TraesCS1B01G268900.1 | Wheat | nucleus | 51.92 | 43.83 |
| HORVU1Hr1G064950.1 | Barley | nucleus | 51.15 | 43.61 |
| TraesCS1A01G258400.1 | Wheat | nucleus | 51.92 | 43.27 |
| Zm00001d038191_P001 | Maize | nucleus | 50.38 | 41.99 |
| Zm00001d010280_P001 | Maize | nucleus | 48.08 | 41.81 |
| KRH76596 | Soybean | mitochondrion | 15.38 | 33.06 |
| KRH24748 | Soybean | nucleus | 38.08 | 32.35 |
| Os05t0412000-00 | Rice | nucleus | 51.15 | 32.2 |
| KRH29751 | Soybean | nucleus | 38.08 | 30.65 |
| KRH16193 | Soybean | nucleus | 16.92 | 21.78 |
| KRH25649 | Soybean | cytosol | 15.0 | 17.18 |
| KRH33116 | Soybean | cytosol | 17.69 | 16.14 |
| KRH60428 | Soybean | nucleus | 15.0 | 15.85 |
| KRH60425 | Soybean | nucleus | 16.92 | 12.22 |
| KRG93902 | Soybean | nucleus | 18.08 | 12.21 |
| KRG93917 | Soybean | cytosol | 16.54 | 11.75 |
| KRG97483 | Soybean | nucleus | 19.23 | 10.99 |
| KRH41727 | Soybean | nucleus | 20.0 | 10.57 |
| KRH41726 | Soybean | nucleus | 15.77 | 10.22 |
| KRH02311 | Soybean | nucleus | 26.54 | 10.19 |
| KRH61694 | Soybean | nucleus | 25.38 | 10.06 |
| KRH50777 | Soybean | nucleus | 25.77 | 9.87 |
| KRH70359 | Soybean | nucleus | 23.46 | 9.64 |
| KRH42619 | Soybean | nucleus | 18.85 | 9.61 |
| KRH58247 | Soybean | cytosol | 11.15 | 9.57 |
| KRH49669 | Soybean | nucleus | 23.08 | 9.48 |
| KRH05273 | Soybean | nucleus | 24.23 | 9.45 |
| KRH12005 | Soybean | nucleus | 24.23 | 9.38 |
| KRH37916 | Soybean | nucleus | 25.0 | 9.31 |
| KRH38615 | Soybean | nucleus | 18.85 | 9.28 |
| KRH37035 | Soybean | nucleus | 23.85 | 9.21 |
| KRH12938 | Soybean | nucleus | 24.62 | 9.13 |
| KRH15779 | Soybean | nucleus | 23.46 | 9.08 |
| KRH52361 | Soybean | nucleus | 24.23 | 9.05 |
| KRH20086 | Soybean | nucleus | 23.46 | 8.97 |
| KRH03086 | Soybean | nucleus | 23.46 | 8.96 |
| KRH31403 | Soybean | nucleus | 19.62 | 8.44 |
| KRH58726 | Soybean | endoplasmic reticulum, extracellular | 20.38 | 8.35 |
| KRH09142 | Soybean | nucleus | 21.15 | 8.22 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100816747 | MapMan:35.1 | EMBL:ACUP02001030 | EnsemblPlantsGene:GLYMA_02G162600 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | UniProt:I1JFQ0 | InterPro:IPR017930 |
| ProteinID:KRH71690.1 | ProteinID:KRH71691.1 | EnsemblPlants:KRH71692 | ProteinID:KRH71692 | ProteinID:KRH71692.1 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31442 | PANTHER:PTHR31442:SF1 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000233707A | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr2:-:21485033..21489578
Molecular Weight (calculated)
29021.3 Da
IEP (calculated)
6.710
GRAVY (calculated)
-0.593
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MREEDSNWFS SWEEELPPPE ELMPLSQTLI SHNLAIAFDI TNPSQQQQQQ QYSQQGQEQE QQQQFPHQVP DNIDEEPART LKRPRLVWTP QLHKRFVDAV
101: AHLGIKNAVP KTIMQLMSVD GLTRENVASH LQKYRLYLKR MQGLSAGGGV GRVASADPTT DRLFASSPVP PHFLQRPGSD HFLPLVSVPA LQQQQQRHHH
201: QHLAVAASAA AGHRQFGLPP NGHFELPILS RMGAPVPGYA AEDVESGGRK VLTLFPAGDE
101: AHLGIKNAVP KTIMQLMSVD GLTRENVASH LQKYRLYLKR MQGLSAGGGV GRVASADPTT DRLFASSPVP PHFLQRPGSD HFLPLVSVPA LQQQQQRHHH
201: QHLAVAASAA AGHRQFGLPP NGHFELPILS RMGAPVPGYA AEDVESGGRK VLTLFPAGDE
001: MREDNPNWFL RWEEELPSPE ELIPISQTLI TPHLALAFQI GSPNHHLGSK RTTAIYHQKL QSSTTPTTPT PTPPPMMMNS DFGGGDSTDL GSGSIGGEPA
101: RTLKRPRLVW TPQLHKRFVD AVGHLGIKNA VPKTIMQLMS VEGLTRENVA SHLQKYRLYL RRMQGGNGNG ITGGHVIVSD SATDRLFASS PVPAHFLSPD
201: YLMPPLEHSY MGKHVITQQN QVVRNLRYED SEYGHGSMKM LKLFPAGN
101: RTLKRPRLVW TPQLHKRFVD AVGHLGIKNA VPKTIMQLMS VEGLTRENVA SHLQKYRLYL RRMQGGNGNG ITGGHVIVSD SATDRLFASS PVPAHFLSPD
201: YLMPPLEHSY MGKHVITQQN QVVRNLRYED SEYGHGSMKM LKLFPAGN
Arabidopsis Description
MYBC1MYBC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VYV1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.