Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010280_P001 | Maize | nucleus | 83.01 | 86.62 |
| TraesCS1D01G257700.1 | Wheat | nucleus | 78.21 | 78.96 |
| TraesCS1B01G268900.1 | Wheat | nucleus | 77.24 | 78.25 |
| HORVU1Hr1G064950.1 | Barley | nucleus | 76.28 | 78.03 |
| TraesCS1A01G258400.1 | Wheat | nucleus | 77.56 | 77.56 |
| Os05t0412000-00 | Rice | nucleus | 78.53 | 59.32 |
| GSMUA_Achr8P05880_001 | Banana | nucleus | 56.41 | 55.87 |
| GSMUA_Achr11P... | Banana | nucleus | 53.53 | 55.12 |
| Solyc10g080960.1.1 | Tomato | nucleus | 44.87 | 52.63 |
| GSMUA_Achr5P27500_001 | Banana | nucleus | 47.44 | 52.11 |
| PGSC0003DMT400072213 | Potato | nucleus | 43.91 | 51.5 |
| Solyc10g078310.1.1 | Tomato | nucleus | 47.12 | 50.69 |
| VIT_08s0040g00900.t01 | Wine grape | nucleus | 49.68 | 50.65 |
| Bra005837.1-P | Field mustard | nucleus | 40.71 | 50.6 |
| Bra009087.1-P | Field mustard | nucleus | 43.27 | 50.56 |
| KRH71692 | Soybean | nucleus | 41.99 | 50.38 |
| PGSC0003DMT400018485 | Potato | nucleus | 46.79 | 50.34 |
| Bra004593.1-P | Field mustard | nucleus | 39.74 | 50.2 |
| Bra029866.1-P | Field mustard | nucleus | 44.87 | 48.95 |
| AT2G40970.1 | Thale cress | nucleus | 38.78 | 48.79 |
| AT5G05090.1 | Thale cress | nucleus | 41.35 | 48.5 |
| KRG95053 | Soybean | nucleus | 46.15 | 46.15 |
| Bra034144.1-P | Field mustard | nucleus | 45.83 | 44.0 |
| KRH66705 | Soybean | nucleus | 45.19 | 43.79 |
| AT3G10760.1 | Thale cress | nucleus | 46.15 | 42.99 |
| CDY36273 | Canola | mitochondrion | 31.73 | 41.42 |
| Zm00001d011785_P001 | Maize | nucleus | 26.6 | 37.9 |
| Zm00001d041960_P001 | Maize | nucleus | 28.85 | 34.88 |
| Zm00001d042892_P001 | Maize | nucleus | 23.4 | 24.01 |
| Zm00001d032784_P001 | Maize | nucleus | 14.74 | 13.65 |
| Zm00001d036802_P001 | Maize | nucleus | 15.06 | 12.11 |
| Zm00001d045112_P001 | Maize | nucleus | 24.04 | 11.21 |
| Zm00001d048046_P001 | Maize | nucleus | 22.76 | 10.35 |
| Zm00001d028265_P002 | Maize | nucleus | 22.76 | 10.14 |
| Zm00001d015521_P001 | Maize | nucleus | 20.51 | 10.14 |
| Zm00001d012128_P001 | Maize | nucleus | 18.91 | 9.78 |
| Zm00001d042463_P001 | Maize | nucleus | 18.91 | 9.59 |
| Zm00001d046755_P001 | Maize | nucleus | 17.63 | 8.2 |
| Zm00001d018380_P001 | Maize | nucleus | 13.78 | 6.98 |
| Zm00001d036803_P001 | Maize | cytosol | 1.92 | 5.66 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:107305672 | MapMan:35.1 | ProteinID:AQK85996.1 | EMBL:BT086588 | UniProt:C4J6Z1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31442 | PANTHER:PTHR31442:SF1 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI0001A4BBDD | EnsemblPlantsGene:Zm00001d038191 | EnsemblPlants:Zm00001d038191_P001 | EnsemblPlants:Zm00001d038191_T001 |
| SEG:seg | : | : | : | : | : |
Description
G2-like-transcription factor 51Homeodomain-like superfamily protein
Coordinates
chr6:-:151070539..151071477
Molecular Weight (calculated)
31422.0 Da
IEP (calculated)
7.741
GRAVY (calculated)
-0.366
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MREEEEASWF ARGEEQQLLR PDELMPLTQT LITPHLAVAF DITTHGAGGT GAAGGAGAGP GAGGPDINGG GASSAAGSSG GGGGGGGDEP ARTLKRPRLV
101: WTPQLHKRFV DAVAHLGIKN AVPKTIMQLM SVDGLTRENV ASHLQKYRLY LKRMQGLGGG GGGGGGGGAG GSHSSGSGTD AATEHLFATG PVPFLPPGHR
201: APAAADSYPP FSPMGGAHHH QHHQIGHFHH PATRPLAHYG GAAVGGFDHG FLSRVGPPAG PPGMHHRMVG GGAGMGMMAP ASFADEMDLG SRGGGGSGSR
301: RELTLFPTSG DH
101: WTPQLHKRFV DAVAHLGIKN AVPKTIMQLM SVDGLTRENV ASHLQKYRLY LKRMQGLGGG GGGGGGGGAG GSHSSGSGTD AATEHLFATG PVPFLPPGHR
201: APAAADSYPP FSPMGGAHHH QHHQIGHFHH PATRPLAHYG GAAVGGFDHG FLSRVGPPAG PPGMHHRMVG GGAGMGMMAP ASFADEMDLG SRGGGGSGSR
301: RELTLFPTSG DH
001: MREDDSDWFA RWEEELPSPE ELMPISQSLI SPDLALAFDI RTPNHGNGNS NQPHHHHHHQ TTPPTPSQLQ LPSSQANSSA EFAADSADLG SGGAAGDEPA
101: RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSSGG GAGSDPATDR LFASSPVPAH FLHPNRVPSS
201: DHFMPSFVPI ATLQQQQQMA AAAAAAAAAN PHLQPPQFHR QIAAAHFGSP TNGGFSSPTS NGQFGSPTSN GFGSPTTNGK FDPSFLAVRQ TQQQPIQRMS
301: TPSLHSPVSN YVEDLESANA NGGRTVLTLF PTRDD
101: RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSSGG GAGSDPATDR LFASSPVPAH FLHPNRVPSS
201: DHFMPSFVPI ATLQQQQQMA AAAAAAAAAN PHLQPPQFHR QIAAAHFGSP TNGGFSSPTS NGQFGSPTSN GFGSPTTNGK FDPSFLAVRQ TQQQPIQRMS
301: TPSLHSPVSN YVEDLESANA NGGRTVLTLF PTRDD
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SG82]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.