Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 79.05 | 82.18 |
| GSMUA_Achr2P01920_001 | Banana | nucleus, plastid | 71.43 | 77.59 |
| GSMUA_Achr5P27500_001 | Banana | nucleus | 69.84 | 77.46 |
| Solyc10g080960.1.1 | Tomato | nucleus | 50.48 | 59.77 |
| GSMUA_Achr10P... | Banana | nucleus | 45.4 | 59.58 |
| VIT_08s0040g00900.t01 | Wine grape | nucleus | 57.78 | 59.48 |
| PGSC0003DMT400072213 | Potato | nucleus | 49.84 | 59.02 |
| Bra029866.1-P | Field mustard | nucleus | 52.7 | 58.04 |
| HORVU1Hr1G064950.1 | Barley | nucleus | 55.56 | 57.38 |
| Bra009087.1-P | Field mustard | nucleus | 48.57 | 57.3 |
| PGSC0003DMT400018485 | Potato | nucleus | 52.7 | 57.24 |
| Solyc10g078310.1.1 | Tomato | nucleus | 52.7 | 57.24 |
| KRH71692 | Soybean | nucleus | 46.67 | 56.54 |
| TraesCS1B01G268900.1 | Wheat | nucleus | 55.24 | 56.49 |
| Zm00001d038191_P001 | Maize | nucleus | 55.87 | 56.41 |
| TraesCS1D01G257700.1 | Wheat | nucleus | 55.24 | 56.31 |
| Bra004593.1-P | Field mustard | nucleus | 44.13 | 56.28 |
| Zm00001d010280_P001 | Maize | nucleus | 53.33 | 56.19 |
| TraesCS1A01G258400.1 | Wheat | nucleus | 54.92 | 55.45 |
| AT5G05090.1 | Thale cress | nucleus | 46.67 | 55.26 |
| KRG95053 | Soybean | nucleus | 54.6 | 55.13 |
| AT2G40970.1 | Thale cress | nucleus | 43.17 | 54.84 |
| Bra005837.1-P | Field mustard | nucleus | 43.49 | 54.58 |
| Bra034144.1-P | Field mustard | nucleus | 53.33 | 51.69 |
| KRH66705 | Soybean | nucleus | 52.06 | 50.93 |
| AT3G10760.1 | Thale cress | nucleus | 53.02 | 49.85 |
| CDY36273 | Canola | mitochondrion | 37.46 | 49.37 |
| GSMUA_Achr5P07060_001 | Banana | nucleus | 32.7 | 44.98 |
| Os05t0412000-00 | Rice | nucleus | 54.6 | 41.65 |
| GSMUA_Achr10P... | Banana | nucleus | 34.6 | 39.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.43 | 32.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 12.06 | 14.29 |
| GSMUA_Achr10P... | Banana | nucleus | 19.05 | 13.82 |
| GSMUA_Achr3P14630_001 | Banana | cytosol | 15.87 | 13.7 |
| GSMUA_Achr8P32070_001 | Banana | nucleus | 18.41 | 10.64 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 7.62 | 10.48 |
| GSMUA_Achr11P... | Banana | nucleus | 20.63 | 9.86 |
| GSMUA_Achr5P16510_001 | Banana | cytosol, nucleus, plastid | 6.67 | 9.72 |
| GSMUA_Achr3P13400_001 | Banana | nucleus | 19.05 | 9.55 |
| GSMUA_Achr10P... | Banana | nucleus | 19.37 | 9.34 |
| GSMUA_Achr11P... | Banana | nucleus | 18.73 | 9.34 |
| GSMUA_Achr2P05130_001 | Banana | nucleus | 18.73 | 9.16 |
| GSMUA_Achr1P22230_001 | Banana | nucleus | 20.32 | 8.85 |
| GSMUA_Achr8P30850_001 | Banana | nucleus | 20.0 | 8.75 |
| GSMUA_Achr9P16610_001 | Banana | nucleus | 18.41 | 8.02 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr8G05880_001 |
| EnsemblPlants:GSMUA_Achr8P05880_001 | EnsemblPlants:GSMUA_Achr8T05880_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0TMZ1 | InterPro:Myb_dom |
| InterPro:Myb_dom_plants | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR31442 | PANTHER:PTHR31442:SF1 | InterPro:SANT/Myb |
| SUPFAM:SSF46689 | TIGRFAMs:TIGR01557 | UniParc:UPI000294F5D4 | SEG:seg | : | : |
Description
homeodomain-related, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G05880_001]
Coordinates
chr8:+:3817826..3818990
Molecular Weight (calculated)
33759.1 Da
IEP (calculated)
6.767
GRAVY (calculated)
-0.377
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MREEEETEWF ARWEEHLPSP EELTPLSQTL ITPALAIAFD IPIPADGNPS PILSPHFLHR PLPPPASPHL PPPPDFETSD LNSASAASGS GGGGDEPART
101: LKRPRLVWTP QLHKRFVDAV AHLGIKNAVP KTIMQLMSVD GLTRENVASH LQKYRLYLKR MQGLSTSGGG GGGPISASDA ATDQLFASAP VPHHFLSRRP
201: VAGLGGPDPF LPYMPVTALQ HHQQITAAMQ QQQHYHQRHL GHFGSPTGGG GFDHGFLNRP AVSQSGMHQM LGAAPGMGLM QLTPSSAASF VDDLEPARGG
301: SGERKVLTLF PTGED
101: LKRPRLVWTP QLHKRFVDAV AHLGIKNAVP KTIMQLMSVD GLTRENVASH LQKYRLYLKR MQGLSTSGGG GGGPISASDA ATDQLFASAP VPHHFLSRRP
201: VAGLGGPDPF LPYMPVTALQ HHQQITAAMQ QQQHYHQRHL GHFGSPTGGG GFDHGFLNRP AVSQSGMHQM LGAAPGMGLM QLTPSSAASF VDDLEPARGG
301: SGERKVLTLF PTGED
001: MREDDSDWFA RWEEELPSPE ELMPISQSLI SPDLALAFDI RTPNHGNGNS NQPHHHHHHQ TTPPTPSQLQ LPSSQANSSA EFAADSADLG SGGAAGDEPA
101: RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSSGG GAGSDPATDR LFASSPVPAH FLHPNRVPSS
201: DHFMPSFVPI ATLQQQQQMA AAAAAAAAAN PHLQPPQFHR QIAAAHFGSP TNGGFSSPTS NGQFGSPTSN GFGSPTTNGK FDPSFLAVRQ TQQQPIQRMS
301: TPSLHSPVSN YVEDLESANA NGGRTVLTLF PTRDD
101: RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSSGG GAGSDPATDR LFASSPVPAH FLHPNRVPSS
201: DHFMPSFVPI ATLQQQQQMA AAAAAAAAAN PHLQPPQFHR QIAAAHFGSP TNGGFSSPTS NGQFGSPTSN GFGSPTTNGK FDPSFLAVRQ TQQQPIQRMS
301: TPSLHSPVSN YVEDLESANA NGGRTVLTLF PTRDD
Arabidopsis Description
Homeodomain-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SG82]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.