Factsheet for GSMUA_Achr1P22230_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P30850_001	Banana	nucleus	74.55	74.86
GSMUA_AchrUn_...	Banana	nucleus	19.92	54.14
TraesCS4A01G063100.1	Wheat	nucleus	50.9	53.8
TraesCS4D01G239900.1	Wheat	nucleus	50.76	53.66
TraesCS4B01G240100.1	Wheat	nucleus	50.62	53.51
HORVU4Hr1G066480.1	Barley	nucleus	50.48	53.36
OQU92974	Sorghum	nucleus	50.07	52.77
Os03t0224200-01	Rice	nucleus	50.21	52.53
Zm00001d048046_P001	Maize	nucleus	48.82	51.46
CDY64566	Canola	nucleus	26.14	50.27
Zm00001d028265_P002	Maize	nucleus	48.55	50.14
Bra026635.1-P	Field mustard	nucleus	26.0	49.87
CDY09419	Canola	nucleus	26.0	49.87
AT2G01760.2	Thale cress	nucleus	26.69	47.07
VIT_01s0011g05830.t01	Wine grape	nucleus	41.63	43.06
CDY68249	Canola	nucleus	25.86	42.79
KRH70359	Soybean	nucleus	36.93	42.18
PGSC0003DMT400075907	Potato	nucleus	38.04	42.11
Solyc04g008050.2.1	Tomato	nucleus	37.48	41.44
KRH49669	Soybean	nucleus	35.82	40.92
GSMUA_Achr3P14630_001	Banana	cytosol	20.47	40.55
GSMUA_Achr5P16510_001	Banana	cytosol, nucleus, plastid	10.51	35.19
GSMUA_Achr11P...	Banana	nucleus	30.15	33.08
GSMUA_Achr5P13050_001	Banana	cytosol	10.24	32.31
GSMUA_Achr10P...	Banana	nucleus	19.23	32.03
GSMUA_Achr9P16610_001	Banana	nucleus	31.4	31.4
GSMUA_Achr5P07060_001	Banana	nucleus	9.27	29.26
GSMUA_Achr8P32070_001	Banana	nucleus	21.72	28.81
GSMUA_Achr3P13400_001	Banana	nucleus	24.76	28.5
GSMUA_Achr11P...	Banana	nucleus	24.2	27.69
GSMUA_Achr10P...	Banana	nucleus	24.76	27.41
GSMUA_Achr2P05130_001	Banana	nucleus	24.34	27.33
GSMUA_Achr10P...	Banana	nucleus	9.54	24.73
GSMUA_Achr10P...	Banana	nucleus	7.88	23.75
GSMUA_AchrUn_...	Banana	nucleus	9.54	22.62
GSMUA_Achr2P01920_001	Banana	nucleus, plastid	8.3	20.69
GSMUA_Achr11P...	Banana	nucleus	8.58	20.46
GSMUA_Achr8P05880_001	Banana	nucleus	8.85	20.32
GSMUA_Achr5P27500_001	Banana	nucleus	7.75	19.72

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr1G22230_001	EnsemblPlants:GSMUA_Achr1P22230_001	EnsemblPlants:GSMUA_Achr1T22230_001	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930
UniProt:M0S231	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392
PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF32	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb
SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0002961D7C
SEG:seg	:	:	:	:	:

Description

two-component response regulator, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G22230_001]

Coordinates

chr1:-:16681627..16689107

Molecular Weight (calculated)

78321.7 Da

IEP (calculated)

6.366

GRAVY (calculated)

-0.298

Length

723 amino acids

Sequence
(BLAST)

001: MSVGSSYASS KLESDRVPDK FPVGMKILLV DDDPICLAVV QRMLLNCQYD VTTCSEATRA LSLLRENKGA FDLIISDVHM PDMDGFRLLE LVGLEMDLPV
101: IMMSGDTRFN VVMKGVSHGA CDFLTKPVRM EELQNIWQHV VRRKWLDSKE IERSGSVEEA DRGRQVTDDS EYASTVNDGI DCSWKYQRKK RDAKEEDDNE
201: LDNIDPSSSK KPRVVWSVEL HQQFVNAVNQ LGIDKAVPKR ILELMNVPGL TRENVASHLQ KFRLYLKRLS GVAQHHTGLN SPLYGASSNA KVGQLGRFDF
301: QALAVSGQIS PETLAALQDE LLGHPPCNLA MPTIDQQVLQ QASVQRNNSV TFERGIAFGQ PLLKGQAVSS FPVWPANDLG ALGSASNLGG LNTSQNSNML
401: MTMLQQPQPQ TVPSESNHAI NVQRSCLVAP AKSSNKFQVQ GNPMHINQDS TIISSQSSAN FQPGNAVVPV IQDSAVVTSN SSTSLKTGNN LFVTNHRSTI
501: LPSQSLTGIS LGTDSGLLNQ GSIIVPSQPL NSSQAGSNSI LSSQNSMLVP SHLSGSLRTD KNIIPITHNS SLNNSSSLVN YNRLPTQSNV MPSSMKQVLD
601: NLAALHSPDI SISHPNGTHS LVPSSCNIEA TDRLLVKLPD KGLGKNLGFV GKGTCLPSRF AVDDIESPTN DLTNSSAYTG DDGYLQNQDI FGISGTLQSG
701: HCATTSFKLS IDIQSQSSNQ AMQ

Best Arabidopsis Sequence Match ( AT3G16857.1 )
(BLAST)

001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQV

Arabidopsis Description

ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.