Factsheet for GSMUA_Achr10P06040_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus	70.6	72.94
GSMUA_Achr2P05130_001	Banana	nucleus	71.82	72.83
GSMUA_AchrUn_...	Banana	nucleus	28.18	69.17
GSMUA_Achr3P13400_001	Banana	nucleus	47.93	49.84
GSMUA_Achr5P16510_001	Banana	cytosol, nucleus, plastid	14.55	43.98
VIT_04s0008g05900.t01	Wine grape	nucleus	45.48	42.86
GSMUA_Achr3P14630_001	Banana	cytosol	22.97	41.1
Solyc07g005140.2.1	Tomato	nucleus	41.65	40.9
KRH61694	Soybean	nucleus	40.12	39.94
PGSC0003DMT400020233	Potato	nucleus	42.73	39.46
Solyc12g010330.1.1	Tomato	nucleus	42.73	39.41
KRH05273	Soybean	nucleus	40.12	39.28
KRH15779	Soybean	nucleus	40.12	38.99
KRH52361	Soybean	nucleus	40.28	37.79
PGSC0003DMT400008290	Potato	nucleus	41.65	35.19
GSMUA_Achr10P...	Banana	nucleus	22.51	33.87
GSMUA_Achr5P13050_001	Banana	cytosol	11.49	32.75
GSMUA_Achr11P...	Banana	nucleus	28.64	28.38
GSMUA_Achr8P32070_001	Banana	nucleus	23.43	28.07
GSMUA_Achr5P07060_001	Banana	nucleus	9.49	27.07
GSMUA_Achr9P16610_001	Banana	nucleus	28.94	26.14
GSMUA_Achr8P30850_001	Banana	nucleus	28.79	26.11
Os06t0647200-02	Rice	nucleus	27.26	25.8
GSMUA_Achr1P22230_001	Banana	nucleus	27.41	24.76
GSMUA_Achr10P...	Banana	nucleus	8.73	23.75
GSMUA_Achr10P...	Banana	nucleus	9.95	23.3
GSMUA_AchrUn_...	Banana	nucleus	10.11	21.64
GSMUA_Achr2P01920_001	Banana	nucleus, plastid	9.19	20.69
GSMUA_Achr11P...	Banana	nucleus	9.04	19.47
GSMUA_Achr8P05880_001	Banana	nucleus	9.34	19.37
GSMUA_Achr5P27500_001	Banana	nucleus	8.27	19.01

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	InterPro:CheY-like_superfamily	GO:GO:0000160
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:GSMUA_Achr10G06040_001	EnsemblPlants:GSMUA_Achr10P06040_001	EnsemblPlants:GSMUA_Achr10T06040_001	InterPro:Homeobox-like_sf	InterPro:IPR001789	UniProt:M0RFT1
InterPro:Myb_dom_plants	PFAM:PF00072	PIRSF:PIRSF036392	PFscan:PS50110	PANTHER:PTHR43874	PANTHER:PTHR43874:SF7
InterPro:Response_reg_B-typ_pln	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557
UniParc:UPI0002956997	SEG:seg	:	:	:	:

Description

two-component response regulator, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G06040_001]

Coordinates

chr10:+:16524247..16529036

Molecular Weight (calculated)

71535.6 Da

IEP (calculated)

6.017

GRAVY (calculated)

-0.481

Length

653 amino acids

Sequence
(BLAST)

001: MTVEERKGSR DQFPVGMRVL AVDDDPICLK LLEALLVRCQ YSVTTTDKAI TALKLLRENK DKFDLVISDV HMPDMDGFKL LELIGLEMDL PVIMLSANGE
101: TQTVMKGITH GACDYLLKPV RIEELRNIWQ HVIRRRKFER RCDNDPDSRE DGQKAHIGSS EDGQGVADHN GQSNKKRKDQ IEFDEDDSED NMQENEDPST
201: QKKPRVVWTV ELHRKFVAAV NQLGIDKAVP KKILDLMNVE KLTRENKYRL YLKRLSAVAG HQASLVAAVG GRNPSYLHMS SLSGLRNYST LGGSRQLPTL
301: GSLQLNGLGR INGPSTLGMH GLLPSQTVQL GMPRNSELEQ FQQPLLMQES KDHLPASLYG SGLASGPCSG SFPNVPDNAL LLQENKQRNQ PGGLGKPSSV
401: RMSSSSSELY KIDLPDVSQF PNITDRCNDS WQGAVGSTDY SANTLHISLS HNDFSPGNIG GKFSSMNSHA ATKALDESPR VAAGSGGQNR VRPLNENTIA
501: MPAGVNKDPK FSNFNVIGNS GQKWDYTFNS NVISSTSSNS LLPNLRITDA ATQCQTPGSV FSNKRLDVDA IGQVHFGPPL VTQNCIIDKS TGDSQLNFRS
601: EYALETASLP SGLNSDGCSF DDLVNAMIKT EHEEVAFTDM DLGCDAYSLG TCM

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.