Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400008290 | Potato | nucleus | 95.94 | 82.54 |
| Solyc12g010330.1.1 | Tomato | nucleus | 71.43 | 67.09 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.56 | 63.91 |
| TraesCS7B01G408600.1 | Wheat | cytosol | 12.78 | 62.5 |
| VIT_11s0206g00060.t01 | Wine grape | nucleus | 60.75 | 58.3 |
| TraesCS7A01G510400.1 | Wheat | cytosol | 7.22 | 57.14 |
| TraesCS7D01G499700.1 | Wheat | cytosol | 9.17 | 57.01 |
| TraesCS7A01G539700.1 | Wheat | cytosol, nucleus, plastid | 9.32 | 55.86 |
| KRH16193 | Soybean | nucleus | 16.84 | 55.45 |
| Zm00001d036803_P001 | Maize | cytosol | 8.57 | 53.77 |
| TraesCS7B01G421000.1 | Wheat | cytosol | 8.57 | 53.27 |
| TraesCS7B01G420800.1 | Wheat | cytosol | 8.42 | 52.34 |
| KRH33116 | Soybean | cytosol | 21.5 | 50.18 |
| KRH37916 | Soybean | nucleus | 52.48 | 50.0 |
| KRH12938 | Soybean | nucleus | 51.73 | 49.07 |
| KXG20365 | Sorghum | cytosol | 7.52 | 46.3 |
| CDX87845 | Canola | cytosol, extracellular | 9.02 | 44.78 |
| HORVU7Hr1G112860.2 | Barley | cytosol | 14.14 | 44.76 |
| VIT_04s0008g05900.t01 | Wine grape | nucleus | 46.62 | 44.73 |
| CDY13465 | Canola | nucleus | 33.98 | 43.63 |
| KRH61694 | Soybean | nucleus | 43.01 | 43.6 |
| Bra023972.1-P | Field mustard | nucleus | 33.83 | 43.44 |
| CDX72337 | Canola | nucleus | 33.83 | 43.02 |
| KRH03086 | Soybean | nucleus | 43.61 | 42.58 |
| CDX68803 | Canola | nucleus | 32.63 | 42.47 |
| AT4G31920.1 | Thale cress | nucleus | 35.19 | 42.39 |
| GSMUA_Achr2P05130_001 | Banana | nucleus | 41.05 | 42.39 |
| KRH05273 | Soybean | nucleus | 42.26 | 42.13 |
| Bra032035.1-P | Field mustard | nucleus | 36.54 | 41.82 |
| CDY35371 | Canola | nucleus | 36.54 | 41.82 |
| GSMUA_Achr11P... | Banana | nucleus | 39.7 | 41.77 |
| CDY70103 | Canola | nucleus | 36.24 | 41.77 |
| GSMUA_Achr10P... | Banana | nucleus | 40.9 | 41.65 |
| KRH20086 | Soybean | nucleus | 42.56 | 41.62 |
| EES06387 | Sorghum | nucleus | 39.4 | 41.52 |
| KRH15779 | Soybean | nucleus | 41.8 | 41.37 |
| KRH52361 | Soybean | nucleus | 43.16 | 41.24 |
| Zm00001d015521_P001 | Maize | nucleus | 38.8 | 40.89 |
| AT2G25180.1 | Thale cress | nucleus | 36.54 | 40.77 |
| Os02t0182100-01 | Rice | nucleus | 38.35 | 40.73 |
| TraesCS6B01G174400.1 | Wheat | nucleus | 37.74 | 40.35 |
| HORVU6Hr1G028680.1 | Barley | nucleus | 37.44 | 39.97 |
| GSMUA_Achr3P13400_001 | Banana | nucleus | 37.59 | 39.81 |
| TraesCS6A01G146200.3 | Wheat | nucleus | 37.44 | 38.91 |
| TraesCS6D01G135500.3 | Wheat | nucleus | 37.59 | 38.76 |
| Os02t0796500-01 | Rice | nucleus | 39.25 | 37.94 |
| TraesCS6D01G342200.1 | Wheat | nucleus | 38.35 | 37.78 |
| HORVU7Hr1G112830.1 | Barley | cytosol, nucleus | 9.62 | 37.65 |
| TraesCS6B01G392000.1 | Wheat | nucleus | 38.05 | 37.54 |
| TraesCS6A01G359200.1 | Wheat | nucleus | 38.05 | 37.43 |
| Zm00001d045112_P001 | Maize | nucleus | 36.99 | 36.77 |
| TraesCS7D01G148000.1 | Wheat | nucleus | 33.08 | 36.61 |
| EES07684 | Sorghum | nucleus | 37.14 | 36.59 |
| KXG19480 | Sorghum | nucleus | 36.84 | 36.46 |
| TraesCS7A01G146400.1 | Wheat | nucleus | 33.38 | 36.16 |
| Os06t0183100-01 | Rice | nucleus | 37.74 | 36.06 |
| TraesCS7A01G146500.1 | Wheat | nucleus | 32.78 | 36.03 |
| HORVU6Hr1G085560.5 | Barley | nucleus | 36.99 | 35.91 |
| TraesCS7D01G148200.1 | Wheat | nucleus | 35.19 | 35.51 |
| GSMUA_Achr10P... | Banana | nucleus | 23.16 | 35.48 |
| TraesCS7B01G049000.1 | Wheat | nucleus | 33.23 | 35.42 |
| TraesCS7A01G146700.1 | Wheat | nucleus | 35.04 | 35.36 |
| TraesCS7B01G049200.1 | Wheat | nucleus | 34.89 | 35.31 |
| HORVU7Hr1G030050.1 | Barley | nucleus | 33.23 | 35.3 |
| Zm00001d018380_P001 | Maize | nucleus | 31.88 | 34.42 |
| TraesCS7D01G489600.1 | Wheat | nucleus | 25.26 | 33.47 |
| HORVU7Hr1G114130.2 | Barley | nucleus | 24.51 | 33.27 |
| Solyc05g054390.2.1 | Tomato | nucleus | 32.48 | 32.58 |
| TraesCS7A01G510300.1 | Wheat | nucleus | 24.06 | 32.06 |
| Solyc04g008050.2.1 | Tomato | nucleus | 31.13 | 31.65 |
| TraesCS3B01G517000.1 | Wheat | nucleus | 27.07 | 31.52 |
| HORVU7Hr1G030000.4 | Barley | nucleus | 35.04 | 31.36 |
| TraesCS7D01G525900.1 | Wheat | nucleus | 27.22 | 31.26 |
| TraesCS7D01G499600.1 | Wheat | nucleus | 23.31 | 31.25 |
| CDY02794 | Canola | nucleus | 22.41 | 31.24 |
| TraesCS7A01G511300.1 | Wheat | nucleus | 26.62 | 31.0 |
| TraesCS3A01G473600.1 | Wheat | nucleus | 26.47 | 30.82 |
| TraesCS7B01G422000.1 | Wheat | nucleus | 26.02 | 30.73 |
| TraesCS7D01G500600.1 | Wheat | nucleus | 26.32 | 30.65 |
| TraesCSU01G040900.1 | Wheat | nucleus | 26.32 | 30.65 |
| OQU78916 | Sorghum | nucleus | 25.26 | 30.49 |
| TraesCS7A01G511100.1 | Wheat | nucleus | 26.17 | 30.47 |
| TraesCS7A01G502300.1 | Wheat | nucleus | 25.86 | 30.34 |
| HORVU7Hr1G114450.2 | Barley | nucleus | 27.07 | 30.25 |
| Solyc01g065540.2.1 | Tomato | nucleus | 30.68 | 30.13 |
| TraesCS7B01G420900.1 | Wheat | nucleus | 22.11 | 29.7 |
| TraesCS7B01G422100.1 | Wheat | nucleus | 25.41 | 29.6 |
| Solyc05g014260.2.1 | Tomato | nucleus | 25.71 | 29.43 |
| HORVU7Hr1G118290.2 | Barley | nucleus | 26.02 | 28.69 |
| Solyc12g099380.1.1 | Tomato | nucleus | 23.91 | 28.65 |
| TraesCS7B01G408700.1 | Wheat | nucleus | 26.92 | 28.41 |
| Solyc11g072330.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 13.68 | 27.58 |
| TraesCSU01G105200.1 | Wheat | nucleus | 21.5 | 27.5 |
| Zm00001d036802_P001 | Maize | nucleus | 15.79 | 27.06 |
| Zm00001d046755_P001 | Maize | nucleus | 27.22 | 26.97 |
| Os06t0647200-02 | Rice | nucleus | 27.82 | 26.81 |
| Solyc10g080960.1.1 | Tomato | nucleus | 10.68 | 26.69 |
| CDY02793 | Canola | nucleus | 24.96 | 26.52 |
| Bra020390.1-P | Field mustard | nucleus | 24.81 | 26.48 |
| CDY32725 | Canola | nucleus | 24.81 | 26.48 |
| TraesCS3A01G473800.1 | Wheat | nucleus | 22.41 | 26.42 |
| AT5G58080.1 | Thale cress | nucleus | 24.81 | 25.98 |
| CDY49965 | Canola | mitochondrion | 13.08 | 25.82 |
| HORVU7Hr1G112890.1 | Barley | nucleus | 26.17 | 25.78 |
| HORVU7Hr1G112840.1 | Barley | nucleus | 25.26 | 25.73 |
| Solyc10g078310.1.1 | Tomato | nucleus | 11.13 | 25.52 |
| EES09342 | Sorghum | nucleus | 26.62 | 25.5 |
| Solyc06g005680.2.1 | Tomato | nucleus | 10.08 | 25.19 |
| KXG20364 | Sorghum | nucleus | 25.26 | 25.15 |
| KXG20361 | Sorghum | nucleus | 25.11 | 24.89 |
| Solyc03g026250.1.1 | Tomato | nucleus | 12.33 | 24.62 |
| Solyc06g076350.2.1 | Tomato | nucleus | 11.58 | 23.91 |
| Solyc07g019550.1.1 | Tomato | nucleus | 12.93 | 23.43 |
| OQU76785 | Sorghum | nucleus | 19.1 | 23.43 |
| Solyc01g091810.1.1 | Tomato | nucleus | 17.29 | 19.9 |
| EER90120 | Sorghum | nucleus | 14.89 | 18.17 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | InterPro:CheY-like_superfamily | GO:GO:0000160 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:IPR017930 | UniProt:K4CAY6 | InterPro:Myb_dom | InterPro:Myb_dom_plants |
| PFAM:PF00072 | PIRSF:PIRSF036392 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF8 |
| InterPro:Response_reg_B-typ_pln | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | EnsemblPlantsGene:Solyc07g005140.2 |
| EnsemblPlants:Solyc07g005140.2.1 | TIGRFAMs:TIGR01557 | UniParc:UPI000276BDB4 | SEG:seg | : | : |
Description
Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:K4CAY6]
Coordinates
chr7:+:162324..167069
Molecular Weight (calculated)
73330.0 Da
IEP (calculated)
7.262
GRAVY (calculated)
-0.666
Length
665 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVEEIRGNM SGGERGNNYD NFPIGMRVLA VDDDPICLKL LDGLLRKCQY QVTTTSQARM ALKMLRENRD RFDLVISDVH MPDMDGFKLL ELVGLEMDLP
101: VIMLSANSDT KLVRKGIDHG ACDYLVKPVR IEELRNIWQH VIRKKKVEPK SQSKSNDQDK SYQVSGESGR GQSPTGNVYP NGKCNKKRKD EEDENDENGN
201: DNEDPTTQKR ARVVWSIELH RKFVAAVGQL GIEKAVPKRI LDLMNVDGLT RENVASHLQK YRLYLKRINS VQTQQANMVA ALGGRDYVRM GSLDGLGDFR
301: TLGGSGRYTH AALSSYSSGG MLGRLNSAAG LSVRNLAASQ LLQPSHGQNL SNSVNAFTKL NPSIPPASQN ASLFQGIPAS LELDQLQQSK SSAHIPLDES
401: RLLTTDVLGC SNNSLPNNPM LLPGNPQQPL TGGGFGNQHS QNITPFSSDS FNTGVNGSSN FLEHGRCNDW QNSVQLSKFQ SNSFPLTESF INSHLPQISA
501: REAAAHLQNS PLDFTSTTSV SPPFEDSRGE IQFRQSMASA VQSMNQTPSQ AWADNKQQYS HNSNNTFGNN LSSQVPNDGS MASLSHSMNQ NNENFGRRMD
601: MSLIGRSSGG SSTLVQHTEH EKLTPDSRTR SNEEYLLEPT KQQVGFSPQG YDSLDDLMTA MKRRG
101: VIMLSANSDT KLVRKGIDHG ACDYLVKPVR IEELRNIWQH VIRKKKVEPK SQSKSNDQDK SYQVSGESGR GQSPTGNVYP NGKCNKKRKD EEDENDENGN
201: DNEDPTTQKR ARVVWSIELH RKFVAAVGQL GIEKAVPKRI LDLMNVDGLT RENVASHLQK YRLYLKRINS VQTQQANMVA ALGGRDYVRM GSLDGLGDFR
301: TLGGSGRYTH AALSSYSSGG MLGRLNSAAG LSVRNLAASQ LLQPSHGQNL SNSVNAFTKL NPSIPPASQN ASLFQGIPAS LELDQLQQSK SSAHIPLDES
401: RLLTTDVLGC SNNSLPNNPM LLPGNPQQPL TGGGFGNQHS QNITPFSSDS FNTGVNGSSN FLEHGRCNDW QNSVQLSKFQ SNSFPLTESF INSHLPQISA
501: REAAAHLQNS PLDFTSTTSV SPPFEDSRGE IQFRQSMASA VQSMNQTPSQ AWADNKQQYS HNSNNTFGNN LSSQVPNDGS MASLSHSMNQ NNENFGRRMD
601: MSLIGRSSGG SSTLVQHTEH EKLTPDSRTR SNEEYLLEPT KQQVGFSPQG YDSLDDLMTA MKRRG
001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
Arabidopsis Description
ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.