CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045112_P001	Maize	nucleus	90.18	90.58
Os06t0183100-01	Rice	nucleus	71.73	69.25
GSMUA_AchrUn_...	Banana	nucleus	26.93	68.05
EES07684	Sorghum	nucleus	59.08	58.81
KXG20365	Sorghum	cytosol	7.14	44.44
EES06387	Sorghum	nucleus	36.31	38.67
Solyc07g005140.2.1	Tomato	nucleus	36.46	36.84
PGSC0003DMT400020233	Potato	nucleus	37.2	35.36
Solyc12g010330.1.1	Tomato	nucleus	36.76	34.89
PGSC0003DMT400008290	Potato	nucleus	36.9	32.08
KXG38401	Sorghum	nucleus	16.52	31.99
OQU78916	Sorghum	nucleus	24.11	29.4
EES04061	Sorghum	nucleus	24.7	28.67
OQU92974	Sorghum	nucleus	27.98	27.41
EES09342	Sorghum	nucleus	26.64	25.79
KXG20364	Sorghum	nucleus	25.0	25.15
KXG20361	Sorghum	nucleus	24.4	24.44
OQU76785	Sorghum	nucleus	17.56	21.77
KXG33682	Sorghum	mitochondrion, nucleus	8.04	19.71
EER90120	Sorghum	nucleus	13.54	16.7

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	UniProt:A0A194YHP2	InterPro:CheY-like_superfamily
GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009719	GO:GO:0009736	GO:GO:0009987	GO:GO:0043565	GO:GO:0045893	InterPro:Homeobox-like_sf
InterPro:IPR001789	InterPro:IPR017930	EnsemblPlants:KXG19480	ProteinID:KXG19480	ProteinID:KXG19480.1	InterPro:Myb_dom
InterPro:Myb_dom_plants	ProteinID:OQU75972.1	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392	PFscan:PS50110
PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF37	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb	SMART:SM00448
EnsemblPlantsGene:SORBI_3010G064700	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0007F21827
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:5131370..5136101

Molecular Weight (calculated)

72890.5 Da

IEP (calculated)

6.420

GRAVY (calculated)

-0.331

Length

672 amino acids

Sequence
(BLAST)

001: MLLGAAAAAA AARMEEKGAI TGRRERDQFP VGMRVLAVDD DPVCLKVLET LLRRCQYHVT TTNQAITALK MLRENRDTYD LVISDVHMPD MDGFKLLELV
101: GLEMDLPVIM LSVNGETKSV MKGITHGACD YLLKPVRIEE LRNIWQHVVR RKFSKRERSN LDIYKDFNKL PSADPCHGHN QITAGASDQS GRISKKRKEM
201: HSDEEDDGEE NDFQEGDEPS AAKKPRVVWS VELHRKFVAA VNQLGIDKAV PKRILELMNV EKLTRENVAS HLQKYRLYLK RLSAVASQQA SIVAAFGGRD
301: PAFLHMGAFE GLQSYQPFAP CAALSSFSPH GLLGRTSAAT FGVPELAPAM TVQTATNNGI ISHCAGDAND FQLSGLQENQ QANLGQGSAT SLGLPQLQQK
401: WIQQETNDLS AVFSGSALAN TLSGALQRVT SSPLPPQELL ESAQSKVSAQ PPITRPSVTV SSELVERTVG VSANLQDSSI SQQGALPIND GFTADKLQLH
501: DPFDSIGGTK FSVTMPVCSS GSLTASSNTK GGASSCSTVL LAPDTGRHPN YLQFGVAGNS RHDMNEIKQD HLHQGLSTGG FNHNFGACMT EQPNPNVSYL
601: MPQVKPNTMA SEDKLKQRNA YDLGIPKLNG GFSSSSCNFD GLLNSMIKAE KDDLSFTDND LGCDFFPLGA CI

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.