CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20365	Sorghum	cytosol	13.07	66.67
EES09342	Sorghum	nucleus	82.58	65.56
Zm00001d046755_P001	Maize	nucleus	78.4	64.38
KXG20361	Sorghum	nucleus	76.41	62.74
KXG20364	Sorghum	nucleus	73.87	60.93
OQU76785	Sorghum	nucleus	45.73	46.49
KRH16193	Soybean	nucleus	15.97	43.56
EER90120	Sorghum	nucleus	39.2	39.63
KRH33116	Soybean	cytosol	20.15	38.95
GSMUA_Achr10P...	Banana	nucleus	23.41	29.72
EES06387	Sorghum	nucleus	33.21	29.0
CDY02794	Canola	nucleus	24.32	28.09
KXG38401	Sorghum	nucleus	16.7	26.51
EES04061	Sorghum	nucleus	27.22	25.91
Solyc07g005140.2.1	Tomato	nucleus	30.49	25.26
PGSC0003DMT400020233	Potato	nucleus	32.3	25.18
Solyc12g010330.1.1	Tomato	nucleus	32.12	25.0
EES07684	Sorghum	nucleus	30.49	24.89
KXG19480	Sorghum	nucleus	29.4	24.11
CDY32725	Canola	nucleus	26.5	23.43
Bra020390.1-P	Field mustard	nucleus	26.5	23.43
CDY02793	Canola	nucleus	26.32	23.16
KRH03086	Soybean	nucleus	28.49	23.05
AT5G58080.1	Thale cress	nucleus	26.32	22.83
KRH20086	Soybean	nucleus	27.59	22.35
PGSC0003DMT400008290	Potato	nucleus	30.31	21.6
OQU92974	Sorghum	nucleus	26.32	21.14
KXG33682	Sorghum	mitochondrion, nucleus	8.71	17.52

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EntrezGene:8084794	UniProt:A0A1Z5R6B6
InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	InterPro:Myb_dom
InterPro:Myb_dom_plants	EnsemblPlants:OQU78916	ProteinID:OQU78916	ProteinID:OQU78916.1	PFAM:PF00072	PIRSF:PIRSF036392
PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF7	InterPro:Response_reg_B-typ_pln	SMART:SM00448
EnsemblPlantsGene:SORBI_3008G071200	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0001A88129
RefSeq:XP_002443012.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:9453581..9458214

Molecular Weight (calculated)

60855.7 Da

IEP (calculated)

5.903

GRAVY (calculated)

-0.536

Length

551 amino acids

Sequence
(BLAST)

001: MDADTFPAGL RVLAVDDDRV CLKILERQLK YCNYNATVVS DARTALDMLR ERKEGNQFDL VISDVIMPNM DGFKLLELIG LEMDLPVIML SANSETQTIM
101: KGIKHGACDY MVKPVRLEQL RGIWTHVVKN SMNDPQNNIN SGSDDDVQKL RYGNGDKGMK DGANHRNKYS KKNKKVVDVA DEDSENTSAQ KKQRVQWCGQ
201: LHQKFVEAVS QIGIDRAAPK KILAIMNVEG LTRENVASHL QKYRIYLRKL GDGKLRNSNP FADETEALRG NMYGPTFIGS PRSRNHSLPR SCSSYASILR
301: GKILGSSRGI PYEDIANGDI LAPSGHLPLQ SPELVKQPSV QLQSCSAGQF NEVAREVHQF AGPSNSWKAD VPSRFSDLGH DVGKPEDPTQ DNIFKINQLS
401: RLAHSSGQVP TFGNEYQKKI TGIMGKDVPV EQVAPFSFGN NTHSTLTPNG NSALAISSST RPDLQIDNSA MLTQVLNGGG ASDNHHDGST INHQAVSDQL
501: NNINEFLMGT SEAQNVESDD LDDFLASLVN QDFINNDDSL IDRDWEFAPL L

Best Arabidopsis Sequence Match ( AT2G25180.1 )
(BLAST)

001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI

Arabidopsis Description

ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.