CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032784_P001	Maize	nucleus	84.15	86.65
Os10t0463400-01	Rice	nucleus	48.13	48.97
VIT_11s0052g01160.t01	Wine grape	cytosol	20.75	33.33
GSMUA_Achr5P13050_001	Banana	cytosol	21.61	32.75
AT5G49240.1	Thale cress	cytoskeleton, cytosol, nucleus	22.19	26.37
CDY56439	Canola	nucleus	20.46	25.82
Bra037427.1-P	Field mustard	nucleus	20.17	25.64
CDX86245	Canola	nucleus	20.17	25.64
KXG20365	Sorghum	cytosol	6.63	21.3
AT3G62670.1	Thale cress	nucleus	24.5	19.95
CDY16482	Canola	nucleus	24.5	19.32
CDX77263	Canola	nucleus	24.78	19.11
CDX76652	Canola	nucleus	22.77	18.85
CDY11437	Canola	nucleus	22.48	18.57
Bra041027.1-P	Field mustard	nucleus	22.48	18.57
Bra014172.1-P	Field mustard	nucleus	23.92	18.49
CDY33920	Canola	nucleus	23.05	18.48
CDY05641	Canola	nucleus	23.63	18.39
Bra020652.1-P	Field mustard	nucleus	23.05	18.14
PGSC0003DMT400090747	Potato	nucleus	29.11	18.07
EES04061	Sorghum	nucleus	29.39	17.62
EES06387	Sorghum	nucleus	31.41	17.27
VIT_07s0005g01010.t01	Wine grape	nucleus	26.22	17.04
CDY29358	Canola	nucleus	24.78	17.03
Bra032275.1-P	Field mustard	nucleus	24.78	17.03
Solyc12g099380.1.1	Tomato	nucleus	27.09	16.94
EES07684	Sorghum	nucleus	32.56	16.74
OQU78916	Sorghum	nucleus	26.51	16.7
KXG19480	Sorghum	nucleus	31.99	16.52
OQU92974	Sorghum	nucleus	31.99	16.18
CDY04335	Canola	nucleus	24.5	16.1
KXG33682	Sorghum	mitochondrion, nucleus	11.82	14.96
OQU76785	Sorghum	nucleus	23.34	14.94
EES09342	Sorghum	nucleus	27.67	13.83
AT1G49190.2	Thale cress	nucleus	23.63	13.18
KXG20364	Sorghum	nucleus	25.07	13.02
KXG20361	Sorghum	nucleus	24.21	12.52
KRH60425	Soybean	nucleus	12.68	12.22
EER90120	Sorghum	nucleus	17.87	11.38
TraesCS7A01G539600.1	Wheat	nucleus	6.05	6.21
TraesCSU01G179800.1	Wheat	nucleus, plastid	0.29	0.3
TraesCSU01G196300.1	Wheat	nucleus, plastid	0.29	0.3

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	UniProt:A0A1B6QKF9	InterPro:CheY-like_superfamily
GO:GO:0000003	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0048576	InterPro:Homeobox-like_sf
InterPro:IPR001789	InterPro:IPR017930	EnsemblPlants:KXG38401	ProteinID:KXG38401	ProteinID:KXG38401.1	InterPro:Myb_dom
InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874
PANTHER:PTHR43874:SF27	InterPro:SANT/Myb	SMART:SM00448	EnsemblPlantsGene:SORBI_3001G227900	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0003C72D1C	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:21860030..21867056

Molecular Weight (calculated)

39283.4 Da

IEP (calculated)

5.651

GRAVY (calculated)

-0.404

Length

347 amino acids

Sequence
(BLAST)

001: MDRELWPSGL RVLVIDNNSS YLSVMEELLI KCSYKVTSYK DVREAMSFIY GNIQIVDLII SDVCFPTEDS LLILQEVTTK FDIPTVIMSS NGDASIVMKY
101: ITSGASDFLI KPVRIEVLKN IWQHVFRKQL IGENRSCSNS AQHLDQVSYP PTIAPASTCA TRTTGIITEA ATATLESATR ETTNGTVTDI QDLRKSRLSW
201: TTQLHRQFIA AVNSLGEKAV PKKILETMKV KHLTREQVAS HLQKYRLHLR KLNQTLHKDD TPSPSSHPNE SNILRTEFNS SLNSTYFDQD GCLEITEYSL
301: PKDDISSGSD CMLGERNNYS PQGFQDFRWD SEKQGSETTY LWNFEAE

Best Arabidopsis Sequence Match ( AT1G67710.1 )
(BLAST)

001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S

Arabidopsis Description

ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.