Factsheet for Bra041027.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11437	Canola	nucleus	98.33	98.33
CDX76652	Canola	nucleus	96.43	96.66
AT3G62670.1	Thale cress	nucleus	55.24	54.46
Bra001378.1-P	Field mustard	nucleus	8.1	34.69
Bra014172.1-P	Field mustard	nucleus	34.29	32.07
Bra001641.1-P	Field mustard	cytosol	10.71	30.41
Bra032275.1-P	Field mustard	nucleus	32.86	27.33
VIT_11s0052g01160.t01	Wine grape	cytosol	13.81	26.85
GSMUA_Achr5P13050_001	Banana	cytosol	14.05	25.76
Bra001377.1-P	Field mustard	nucleus	8.1	25.19
Zm00001d032784_P001	Maize	nucleus	18.33	22.85
KXG38401	Sorghum	nucleus	18.57	22.48
Bra026635.1-P	Field mustard	nucleus	19.29	21.49
Bra037427.1-P	Field mustard	nucleus	12.86	19.78
Bra005837.1-P	Field mustard	nucleus	11.43	19.12
Bra004593.1-P	Field mustard	nucleus	10.71	18.22
Bra009087.1-P	Field mustard	nucleus	11.43	17.98
VIT_07s0005g01010.t01	Wine grape	nucleus	22.86	17.98
Os10t0463400-01	Rice	nucleus	14.29	17.6
Bra023972.1-P	Field mustard	nucleus	21.67	17.57
PGSC0003DMT400090747	Potato	nucleus	22.38	16.82
Bra004076.1-P	Field mustard	nucleus	20.24	16.7
Bra004245.1-P	Field mustard	nucleus	20.0	16.41
Solyc12g099380.1.1	Tomato	nucleus	21.43	16.22
Bra029866.1-P	Field mustard	nucleus	10.95	16.08
Bra032035.1-P	Field mustard	nucleus	22.14	16.01
Bra001643.1-P	Field mustard	nucleus	24.76	16.0
Bra033809.1-P	Field mustard	nucleus	10.71	15.79
Bra012743.1-P	Field mustard	nucleus	22.14	15.71
Bra020652.1-P	Field mustard	nucleus	16.43	15.65
Bra033527.1-P	Field mustard	nucleus	23.33	15.48
Bra018204.1-P	Field mustard	nucleus	11.19	15.46
Bra022183.1-P	Field mustard	nucleus	24.29	14.98
Bra020390.1-P	Field mustard	nucleus	21.67	14.61
Bra034144.1-P	Field mustard	nucleus	10.71	13.85
Bra005928.1-P	Field mustard	nucleus	19.52	10.8
Bra009284.1-P	Field mustard	nucleus	19.52	10.61
Bra028705.1-P	Field mustard	nucleus	17.86	9.78
TraesCS7A01G539600.1	Wheat	nucleus	3.81	4.73
TraesCSU01G179800.1	Wheat	nucleus, plastid	1.43	1.81
TraesCSU01G196300.1	Wheat	nucleus, plastid	1.43	1.81

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EMBL:AENI01008415	EnsemblPlantsGene:Bra041027
EnsemblPlants:Bra041027.1	EnsemblPlants:Bra041027.1-P	InterPro:CheY-like_superfamily	GO:GO:0000003	GO:GO:0000160	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009790	GO:GO:0009791
GO:GO:0009793	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930	UniProt:M4FIU8
InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PFscan:PS50110	PFscan:PS51294
PANTHER:PTHR43874	PANTHER:PTHR43874:SF23	InterPro:SANT/Myb	SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172
InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0002542D41	SEG:seg	:	:

Description

AT3G62670 (E=7e-103) ARR20, MEE41 | ARR20 (ARABIDOPSIS RESPONSE REGULATOR 20); transcription factor/ two-component response regulator

Coordinates

chrA09:-:25897592..25899246

Molecular Weight (calculated)

48187.5 Da

IEP (calculated)

4.792

GRAVY (calculated)

-0.718

Length

420 amino acids

Sequence
(BLAST)

001: MSVSSNILKE NSRDLLREEE PGDDEVEFPI NDEDEDFSIT SIRIVLVDSD PESLCLMKNL MTQYSYQVRD FKNGAEAIAF LMMSKHEIDL VIWDFHVPEI
101: NGLEALKTIG KEMDLPVVIM SHEHKKKTVM ESTKRGSCNF LLKPVSKEII AVLWQHVYRK RVSIYSVESN PEENVGLDQD DIDLYQTNSN SGEQTSSYQK
201: EGKNKKPRMT WTPELHQLFE KAVEKMGGVE QAVPKQILKC MQEEKDAEGL TRNNVASHLQ KYRLNSGKKS SMIQETREDS EWRNAGPNTA LTASKPLPNS
301: IFGLHTRVPY FANDQDARNG PMQYPSTNYF TMDNGHFMTN SFANLPYTDS FHQQQQQQFQ HQQYSNSSLQ LPSVITKQEF PYVSAALENP DLIANENSLY
401: MDLGDYLQEG LSDFDKTNRY

Best Arabidopsis Sequence Match ( AT3G62670.1 )
(BLAST)

001: MSVFSNILDE NSRNLRNEIP CDDGIASPIN DDDEEFLTKS NRVLLVGADS NSSLKNLMTQ YSYQVTKYES GEEAMAFLMK NKHEIDLVIW DFHMPDINGL
101: DALNIIGKQM DLPVVIMSHE YKKETVMESI KYGACDFLVK PVSKEVIAVL WRHVYRKRMS KSGLDKPGES GTVESDPDEY DDLEQDNLYE SNEEGSKNTC
201: DHKEEKSPTK KPRMQWTPEL HHKFEVAVEK MGSLEKAFPK TILKYMQEEL NVQGLTRNNV ASHLQKYRQS SKKTCTPQEP QEDFVWGNAG PDVTLAASKT
301: LLSSHATPSY LINNQAAPRG SYFMNNIPYP STSCLPVNNN NCFMTNPSTY IDQFQHQLQQ QQQHQQYQST LNSISAMLTK QESRHVPSSA MENSEPLMIY
401: NSNLPFGIDE CFPPAGFNIF DQIGHN

Arabidopsis Description

ARR20Putative two-component response regulator ARR20 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZJ8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.