Factsheet for Bra001643.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82389	Canola	nucleus	92.31	98.52
CDX75892	Canola	nucleus	66.31	95.35
Bra001641.1-P	Field mustard	cytosol	20.0	87.84
Bra022183.1-P	Field mustard	nucleus	84.62	80.76
AT3G16857.2	Thale cress	nucleus	82.46	77.68
Bra033527.1-P	Field mustard	nucleus	62.46	64.14
Bra012743.1-P	Field mustard	nucleus	55.54	60.98
KRH12005	Soybean	nucleus	49.54	47.92
KRH37035	Soybean	nucleus	48.77	47.1
PGSC0003DMT400065835	Potato	nucleus	48.46	46.67
Solyc01g065540.2.1	Tomato	nucleus	48.46	46.53
Bra001378.1-P	Field mustard	nucleus	6.46	42.86
Bra026635.1-P	Field mustard	nucleus	23.23	40.05
Bra037427.1-P	Field mustard	nucleus	15.23	36.26
GSMUA_Achr5P16510_001	Banana	cytosol, nucleus, plastid	12.0	36.11
Bra004245.1-P	Field mustard	nucleus	26.0	33.01
Bra023972.1-P	Field mustard	nucleus	25.69	32.24
Bra004076.1-P	Field mustard	nucleus	24.92	31.83
Bra032035.1-P	Field mustard	nucleus	26.92	30.12
Bra001377.1-P	Field mustard	nucleus	6.15	29.63
Bra020652.1-P	Field mustard	nucleus	17.54	25.85
Bra041027.1-P	Field mustard	nucleus	16.0	24.76
Bra004593.1-P	Field mustard	nucleus	9.23	24.29
Bra014172.1-P	Field mustard	nucleus	16.62	24.05
Bra029866.1-P	Field mustard	nucleus	10.46	23.78
Bra020390.1-P	Field mustard	nucleus	22.31	23.27
Bra005837.1-P	Field mustard	nucleus	8.77	22.71
Bra009087.1-P	Field mustard	nucleus	9.08	22.1
Bra018204.1-P	Field mustard	nucleus	10.31	22.04
Bra032275.1-P	Field mustard	nucleus	16.46	21.19
Bra033809.1-P	Field mustard	nucleus	9.08	20.7
Bra034144.1-P	Field mustard	nucleus	10.31	20.62
Bra005928.1-P	Field mustard	nucleus	19.38	16.6
Bra009284.1-P	Field mustard	nucleus	19.54	16.43
Bra028705.1-P	Field mustard	nucleus	19.23	16.3

Protein Annotations

Gene3D:1.10.10.60	MapMan:11.4.2.4	MapMan:15.5.23	Gene3D:3.40.50.2300	EnsemblPlantsGene:Bra001643	EnsemblPlants:Bra001643.1
EnsemblPlants:Bra001643.1-P	InterPro:CheY-like_superfamily	GO:GO:0000160	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Homeobox-like_sf	InterPro:IPR001789	InterPro:IPR017930
UniProt:M4CBR3	InterPro:Myb_dom	InterPro:Myb_dom_plants	PFAM:PF00072	PFAM:PF00249	PIRSF:PIRSF036392
PFscan:PS50110	PFscan:PS51294	PANTHER:PTHR43874	PANTHER:PTHR43874:SF23	InterPro:Response_reg_B-typ_pln	InterPro:SANT/Myb
SMART:SM00448	SUPFAM:SSF46689	SUPFAM:SSF52172	InterPro:Sig_transdc_resp-reg_receiver	TIGRFAMs:TIGR01557	UniParc:UPI0002540AD0
SEG:seg	:	:	:	:	:

Description

AT4G16110 (E=2e-139) ARR2 | ARR2 (ARABIDOPSIS RESPONSE REGULATOR 2); transcription factor/ two-component response regulator

Coordinates

chrA03:+:17656612..17659336

Molecular Weight (calculated)

71288.7 Da

IEP (calculated)

6.897

GRAVY (calculated)

-0.586

Length

650 amino acids

Sequence
(BLAST)

001: MMNRGLGSGG GSSSGKNQGG EAVVEMFPSG LRVLVVDDDP TCLMILERML RTCLYEVTKC NRAEMALSLL RKNKHGFDIV ISDVHMPDMD GFVLLGHVGL
101: EIDLPVIMMS ADDSKSVVLK GVTHGAVDYL IKPVRMEALK NIWQHVVRKR RTEWSGVPTH SGSVEETGER RQQQQQREAV SRGEEDGADD NNSSSVNEGG
201: NNNWRNSSSS SSRKRKEEEG GEEQGDEDAS NLKKPRVVWS VELHQQFVAA VNQLGVEKAV PKKILELMNV PGLTRENVAS HLQKYRIYLR RLGGVSQHQG
301: SLNNSFMTSQ DASFGSLPTL NGFDLQALAQ LPAQSLAQLQ AAGLGRPAAM NSKPGLHVSS SIVDERSVFS FDNPKMNLLH GVPTGMEPRQ LAGLQQHRMT
401: IQQQIAAVRA GHSLQNNGMR MPLASQPQQP FSRPQQSSIR QPMLPNRSGF SGRSSIPESS RVLPTTSYTN LAAQQQHSMA FSNFQQELPV NSFPLASAPG
501: LSVRKPHSSS SSSSSSYREE FNSSEAGFST PSYDMFSSRQ NDWDLRSMLS PHQDSQAYSS SSMSRNNNTA VAATDHSRNH QQTPQGMVSH HQVYGNGGGS
601: SVKVKSETMG FHEQYSNQED LMSALLKQEG IGPVDTEFDF DAYSIDDIPV

Best Arabidopsis Sequence Match ( AT3G16857.2 )
(BLAST)

001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV

Arabidopsis Description

ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.