Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75892 | Canola | nucleus | 71.1 | 95.8 |
| Bra001643.1-P | Field mustard | nucleus | 98.52 | 92.31 |
| CDY54632 | Canola | cytosol | 21.02 | 86.49 |
| CDX82391 | Canola | cytosol | 20.53 | 84.46 |
| CDY54630 | Canola | cytosol | 21.18 | 83.23 |
| CDY52720 | Canola | nucleus | 25.12 | 81.82 |
| CDX92102 | Canola | nucleus | 67.16 | 81.47 |
| CDX95898 | Canola | nucleus | 67.32 | 81.19 |
| AT3G16857.2 | Thale cress | nucleus | 84.73 | 74.78 |
| CDY09718 | Canola | nucleus | 58.13 | 58.9 |
| CDX90546 | Canola | nucleus | 56.16 | 57.97 |
| CDY34423 | Canola | nucleus | 44.66 | 57.26 |
| CDY32209 | Canola | nucleus | 43.68 | 56.36 |
| KRH12005 | Soybean | nucleus | 51.4 | 46.58 |
| KRH37035 | Soybean | nucleus | 50.9 | 46.06 |
| Solyc01g065540.2.1 | Tomato | nucleus | 49.43 | 44.46 |
| PGSC0003DMT400065835 | Potato | nucleus | 49.26 | 44.44 |
| CDX73905 | Canola | nucleus | 7.06 | 43.0 |
| CDY64566 | Canola | nucleus | 25.12 | 40.69 |
| CDY09419 | Canola | nucleus | 24.96 | 40.32 |
| CDX87845 | Canola | cytosol, extracellular | 7.88 | 35.82 |
| CDY68249 | Canola | nucleus | 24.96 | 34.78 |
| GSMUA_Achr5P16510_001 | Banana | cytosol, nucleus, plastid | 12.32 | 34.72 |
| CDY56439 | Canola | nucleus | 15.44 | 34.18 |
| CDX86245 | Canola | nucleus | 15.27 | 34.07 |
| CDX96070 | Canola | nucleus | 27.26 | 32.36 |
| CDY28869 | Canola | nucleus | 26.77 | 32.15 |
| CDY13465 | Canola | nucleus | 27.09 | 31.85 |
| CDY01838 | Canola | nucleus | 26.11 | 31.8 |
| CDX72337 | Canola | nucleus | 27.09 | 31.55 |
| CDY07410 | Canola | nucleus | 26.27 | 31.43 |
| CDX73907 | Canola | nucleus | 6.73 | 30.37 |
| CDY70103 | Canola | nucleus | 28.41 | 29.98 |
| CDY35371 | Canola | nucleus | 28.41 | 29.78 |
| CDX68803 | Canola | nucleus | 24.79 | 29.55 |
| CDY02794 | Canola | nucleus | 22.17 | 28.3 |
| CDX76652 | Canola | nucleus | 17.24 | 25.06 |
| CDY33920 | Canola | nucleus | 17.73 | 24.94 |
| CDY11437 | Canola | nucleus | 17.08 | 24.76 |
| CDY16482 | Canola | nucleus | 17.57 | 24.32 |
| CDY05641 | Canola | nucleus | 17.57 | 23.99 |
| CDX79963 | Canola | nucleus | 9.69 | 23.89 |
| CDY02793 | Canola | nucleus | 24.47 | 23.8 |
| CDY53674 | Canola | nucleus | 9.69 | 23.79 |
| CDY32725 | Canola | nucleus | 24.3 | 23.76 |
| CDX77263 | Canola | nucleus | 17.41 | 23.56 |
| CDY08579 | Canola | nucleus | 9.03 | 22.73 |
| CDY00969 | Canola | nucleus | 10.51 | 22.54 |
| CDY52133 | Canola | nucleus | 9.03 | 22.0 |
| CDX80940 | Canola | nucleus | 8.7 | 21.72 |
| CDY49965 | Canola | mitochondrion | 11.99 | 21.66 |
| CDY61256 | Canola | nucleus | 9.69 | 21.53 |
| CDX98816 | Canola | nucleus | 9.2 | 21.46 |
| CDY36273 | Canola | mitochondrion | 8.37 | 21.34 |
| CDY29358 | Canola | nucleus | 17.24 | 20.79 |
| CDX99104 | Canola | nucleus | 9.85 | 20.69 |
| CDY04335 | Canola | nucleus | 17.9 | 20.64 |
| CDX68392 | Canola | nucleus | 8.87 | 20.61 |
| CDX82988 | Canola | nucleus | 8.7 | 20.46 |
| CDX98997 | Canola | nucleus | 18.72 | 19.03 |
| CDX70016 | Canola | nucleus | 18.72 | 19.0 |
| CDY67763 | Canola | nucleus | 17.73 | 18.18 |
| CDX81041 | Canola | nucleus | 15.93 | 17.14 |
| CDX78284 | Canola | nucleus | 15.93 | 17.08 |
| CDY14053 | Canola | nucleus | 18.72 | 15.24 |
| CDX86925 | Canola | nucleus | 14.29 | 12.85 |
| CDY30695 | Canola | nucleus | 11.49 | 9.3 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078D2B7 | EnsemblPlants:CDX82389 |
| ProteinID:CDX82389 | ProteinID:CDX82389.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00137511001 | InterPro:Homeobox-like_sf |
| InterPro:IPR001789 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00072 | PFAM:PF00249 |
| PIRSF:PIRSF036392 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF23 | InterPro:Response_reg_B-typ_pln |
| InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 |
| UniParc:UPI0004EF275B | SEG:seg | : | : | : | : |
Description
BnaA03g34320D
Coordinates
chrLK031828:-:941631..944771
Molecular Weight (calculated)
66815.9 Da
IEP (calculated)
6.832
GRAVY (calculated)
-0.507
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNRGLGSGG GSSSGKNQGG EAVVEMFPSG LRVLVVDDDP TCLMILERML RTCLYEVTKC NRAEMALSLL RKNKHGFDIV ISDVHMPDMD GFKLLEHVGL
101: EMDLPVIMMS ADDSKSVVLK GVTHGAVDYL IKPVRMEALK NIWQHVVRKR RTEWSGVPTH SGSREAVSRG EEDGADDNNS SSEGGEEQGD EDASNLKKPR
201: VVWSVELHQQ FVAAVNQLGV EKAVPKKILE LMNVPGLTRE NVASHLQKYR IYLRRLGGVS QHQGSLNNSF MTSQDASFGS LPTLNGFDLQ ALAQLPAQSL
301: AQLQAAGLGR PAAMNSKPGL HVSSSIVDER SVFSFDNPKM NLLHGVPTGM EPRQLAGLQQ HRMTIQQQIA AVRAGHSLQN NGMRMPLASQ PQQPFSRPQQ
401: SSIRQPMLPN RSGFSGRSSI PESSRVLPTT SYTNLATQQQ HSMAFSNFQQ ELPLNSFPLA SAPGLSVRKP HSSSYREEVN SSEAGFTTPS YDMFSSRQND
501: WDLRSMLSPH QDSQAYSSSS MSRNNNSAVA ATDHSRNHHQ QTPQGMVSHH QVYGNGGGSS VKVKSETMGF HEQYSNQEDL MSALLKQEGI GPVDTEFDFD
601: AYSIDDIPV
101: EMDLPVIMMS ADDSKSVVLK GVTHGAVDYL IKPVRMEALK NIWQHVVRKR RTEWSGVPTH SGSREAVSRG EEDGADDNNS SSEGGEEQGD EDASNLKKPR
201: VVWSVELHQQ FVAAVNQLGV EKAVPKKILE LMNVPGLTRE NVASHLQKYR IYLRRLGGVS QHQGSLNNSF MTSQDASFGS LPTLNGFDLQ ALAQLPAQSL
301: AQLQAAGLGR PAAMNSKPGL HVSSSIVDER SVFSFDNPKM NLLHGVPTGM EPRQLAGLQQ HRMTIQQQIA AVRAGHSLQN NGMRMPLASQ PQQPFSRPQQ
401: SSIRQPMLPN RSGFSGRSSI PESSRVLPTT SYTNLATQQQ HSMAFSNFQQ ELPLNSFPLA SAPGLSVRKP HSSSYREEVN SSEAGFTTPS YDMFSSRQND
501: WDLRSMLSPH QDSQAYSSSS MSRNNNSAVA ATDHSRNHHQ QTPQGMVSHH QVYGNGGGSS VKVKSETMGF HEQYSNQEDL MSALLKQEGI GPVDTEFDFD
601: AYSIDDIPV
001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV
Arabidopsis Description
ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.