Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012743.1-P | Field mustard | nucleus | 97.12 | 96.79 |
| CDY09718 | Canola | nucleus | 91.19 | 89.52 |
| CDY52720 | Canola | nucleus | 26.27 | 82.89 |
| CDY54632 | Canola | cytosol | 19.83 | 79.05 |
| CDX82391 | Canola | cytosol | 19.32 | 77.03 |
| CDY54630 | Canola | cytosol | 19.83 | 75.48 |
| CDY32209 | Canola | nucleus | 51.69 | 64.62 |
| CDX75892 | Canola | nucleus | 49.32 | 64.38 |
| CDY34423 | Canola | nucleus | 51.19 | 63.58 |
| CDX95898 | Canola | nucleus | 54.07 | 63.17 |
| CDX92102 | Canola | nucleus | 53.73 | 63.15 |
| CDX82389 | Canola | nucleus | 57.97 | 56.16 |
| Solyc01g065540.2.1 | Tomato | nucleus | 51.86 | 45.2 |
| PGSC0003DMT400065835 | Potato | nucleus | 51.02 | 44.59 |
| CDX73905 | Canola | nucleus | 7.46 | 44.0 |
| KRH12005 | Soybean | nucleus | 49.32 | 43.3 |
| KRH37035 | Soybean | nucleus | 48.31 | 42.35 |
| CDY64566 | Canola | nucleus | 26.44 | 41.49 |
| CDY09419 | Canola | nucleus | 26.27 | 41.11 |
| CDX87845 | Canola | cytosol, extracellular | 8.81 | 38.81 |
| CDY56439 | Canola | nucleus | 17.12 | 36.73 |
| CDX86245 | Canola | nucleus | 16.78 | 36.26 |
| CDY68249 | Canola | nucleus | 26.27 | 35.47 |
| GSMUA_Achr5P16510_001 | Banana | cytosol, nucleus, plastid | 12.71 | 34.72 |
| CDY13465 | Canola | nucleus | 28.64 | 32.63 |
| CDX72337 | Canola | nucleus | 28.31 | 31.93 |
| CDX73907 | Canola | nucleus | 7.12 | 31.11 |
| CDX68803 | Canola | nucleus | 26.44 | 30.53 |
| CDX96070 | Canola | nucleus | 26.44 | 30.41 |
| CDY01838 | Canola | nucleus | 25.76 | 30.4 |
| CDY28869 | Canola | nucleus | 25.93 | 30.18 |
| CDY07410 | Canola | nucleus | 25.93 | 30.06 |
| CDY70103 | Canola | nucleus | 29.32 | 29.98 |
| CDY35371 | Canola | nucleus | 29.15 | 29.6 |
| CDY02794 | Canola | nucleus | 22.54 | 27.88 |
| CDY33920 | Canola | nucleus | 19.83 | 27.02 |
| CDY05641 | Canola | nucleus | 19.49 | 25.78 |
| CDY08579 | Canola | nucleus | 10.0 | 24.38 |
| CDY16482 | Canola | nucleus | 17.97 | 24.09 |
| CDY02793 | Canola | nucleus | 25.25 | 23.8 |
| CDY32725 | Canola | nucleus | 25.08 | 23.76 |
| CDX80940 | Canola | nucleus | 9.66 | 23.36 |
| CDX77263 | Canola | nucleus | 17.8 | 23.33 |
| CDY49965 | Canola | mitochondrion | 13.22 | 23.15 |
| CDY52133 | Canola | nucleus | 9.66 | 22.8 |
| CDX79963 | Canola | nucleus | 9.49 | 22.67 |
| CDY53674 | Canola | nucleus | 9.49 | 22.58 |
| CDY00969 | Canola | nucleus | 10.85 | 22.54 |
| CDX98816 | Canola | nucleus | 9.83 | 22.22 |
| CDX82988 | Canola | nucleus | 9.66 | 22.01 |
| CDX76652 | Canola | nucleus | 15.59 | 21.96 |
| CDY11437 | Canola | nucleus | 15.59 | 21.9 |
| CDX68392 | Canola | nucleus | 9.66 | 21.76 |
| CDY61256 | Canola | nucleus | 10.0 | 21.53 |
| CDX99104 | Canola | nucleus | 10.51 | 21.38 |
| CDY04335 | Canola | nucleus | 17.97 | 20.08 |
| CDY29358 | Canola | nucleus | 17.12 | 20.0 |
| CDY36273 | Canola | mitochondrion | 7.97 | 19.67 |
| CDX98997 | Canola | nucleus | 19.83 | 19.53 |
| CDY67763 | Canola | nucleus | 19.66 | 19.53 |
| CDX70016 | Canola | nucleus | 19.83 | 19.5 |
| CDX81041 | Canola | nucleus | 17.12 | 17.84 |
| CDX78284 | Canola | nucleus | 16.78 | 17.43 |
| CDY14053 | Canola | nucleus | 18.81 | 14.84 |
| CDX86925 | Canola | nucleus | 15.08 | 13.15 |
| CDY30695 | Canola | nucleus | 12.54 | 9.83 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078DMU2 | EnsemblPlants:CDX90546 |
| ProteinID:CDX90546 | ProteinID:CDX90546.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00151176001 | InterPro:Homeobox-like_sf |
| InterPro:IPR001789 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00072 | PFAM:PF00249 |
| PIRSF:PIRSF036392 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF23 | InterPro:Response_reg_B-typ_pln |
| InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 |
| UniParc:UPI0004EE3BC7 | SEG:seg | : | : | : | : |
Description
BnaA03g42350D
Coordinates
chrLK031863:-:769476..772617
Molecular Weight (calculated)
65092.8 Da
IEP (calculated)
6.644
GRAVY (calculated)
-0.612
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTPGAVGGS SNSDPFPSGL RVLVVDDDPT CLMILERMLK TCLYRVTKCN RAEIALTLLR KNKNGFDIVI SDVHMPDMNG FKLLEHVGLE MDLPVIMMSA
101: DDSKSVVLKG VTHGAVDYLI KPVRIEALKN IWQHVVRKKQ NVSEHSGSVE ETGGDRQQQQ QRDDDDDGGG DNNSSSGNNE GNLRKRKEEE QGDDKEDTSS
201: LKKPRVVWSV ELHQQFVAAV NHLGVDKAVP KKILEMMNVQ GLTRENVASH LQKYRIYLKR LGGVSQGNMN HSFMTGQDPS YGPLNGFDLQ GLATAGQLQA
301: QSLAQLQAVG LGQSSSPLIK PGITSVDQRS FKQLASRFGD GHGPMMMNGG GGNKQTSLLH GVPTGHMRLQ QQQMAGMRVA GPSMQQQQQQ SMLSRRSVPE
401: TRSSRVLPAA THSAFNNSFP LASAPGMMSV SDTKGVNEFC NPSYDILNNF PQQQHHNNNN SVNEWDVRNV GMVFNSHQDN TTSAAFSTSE AYSSSSTHKR
501: KREAELVVEH GQNQQQPQSR SVNPMNQIYM NDGGSVRMKT ETVTCPPQAT TMFHEQYSNQ DDLLSDLLKQ EGLLDTEFDF EGYSFDNILV
101: DDSKSVVLKG VTHGAVDYLI KPVRIEALKN IWQHVVRKKQ NVSEHSGSVE ETGGDRQQQQ QRDDDDDGGG DNNSSSGNNE GNLRKRKEEE QGDDKEDTSS
201: LKKPRVVWSV ELHQQFVAAV NHLGVDKAVP KKILEMMNVQ GLTRENVASH LQKYRIYLKR LGGVSQGNMN HSFMTGQDPS YGPLNGFDLQ GLATAGQLQA
301: QSLAQLQAVG LGQSSSPLIK PGITSVDQRS FKQLASRFGD GHGPMMMNGG GGNKQTSLLH GVPTGHMRLQ QQQMAGMRVA GPSMQQQQQQ SMLSRRSVPE
401: TRSSRVLPAA THSAFNNSFP LASAPGMMSV SDTKGVNEFC NPSYDILNNF PQQQHHNNNN SVNEWDVRNV GMVFNSHQDN TTSAAFSTSE AYSSSSTHKR
501: KREAELVVEH GQNQQQPQSR SVNPMNQIYM NDGGSVRMKT ETVTCPPQAT TMFHEQYSNQ DDLLSDLLKQ EGLLDTEFDF EGYSFDNILV
001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQEG IAPVDGEFDF DAYSIDNIPV
Arabidopsis Description
ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.