Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54632 | Canola | cytosol | 35.82 | 32.43 |
| CDX82391 | Canola | cytosol | 35.82 | 32.43 |
| CDY54630 | Canola | cytosol | 35.07 | 30.32 |
| CDY49965 | Canola | mitochondrion | 66.42 | 26.41 |
| CDY52720 | Canola | nucleus | 30.6 | 21.93 |
| CDX68803 | Canola | nucleus | 64.93 | 17.03 |
| CDY13465 | Canola | nucleus | 65.67 | 16.99 |
| CDX72337 | Canola | nucleus | 65.67 | 16.83 |
| CDY70103 | Canola | nucleus | 55.97 | 13.0 |
| CDY35371 | Canola | nucleus | 55.97 | 12.91 |
| CDY64566 | Canola | nucleus | 32.84 | 11.7 |
| CDY09419 | Canola | nucleus | 32.84 | 11.67 |
| CDX75892 | Canola | nucleus | 35.82 | 10.62 |
| CDX86245 | Canola | nucleus | 20.15 | 9.89 |
| CDY68249 | Canola | nucleus | 32.09 | 9.84 |
| CDY56439 | Canola | nucleus | 20.15 | 9.82 |
| CDX92102 | Canola | nucleus | 36.57 | 9.76 |
| CDX95898 | Canola | nucleus | 36.57 | 9.7 |
| CDY28869 | Canola | nucleus | 36.57 | 9.66 |
| CDY07410 | Canola | nucleus | 36.57 | 9.63 |
| CDY01838 | Canola | nucleus | 35.82 | 9.6 |
| CDY02794 | Canola | nucleus | 33.58 | 9.43 |
| CDX96070 | Canola | nucleus | 35.82 | 9.36 |
| Solyc07g005140.2.1 | Tomato | nucleus | 44.78 | 9.02 |
| PGSC0003DMT400020233 | Potato | nucleus | 47.01 | 8.91 |
| Solyc12g010330.1.1 | Tomato | nucleus | 47.01 | 8.9 |
| CDX90546 | Canola | nucleus | 38.81 | 8.81 |
| GSMUA_Achr3P13400_001 | Banana | nucleus | 41.04 | 8.76 |
| EES06387 | Sorghum | nucleus | 41.04 | 8.72 |
| Zm00001d015521_P001 | Maize | nucleus | 41.04 | 8.72 |
| CDY09718 | Canola | nucleus | 38.81 | 8.65 |
| Os02t0182100-01 | Rice | nucleus | 39.55 | 8.47 |
| TraesCS6B01G174400.1 | Wheat | nucleus | 38.81 | 8.36 |
| HORVU6Hr1G028680.1 | Barley | nucleus | 38.81 | 8.35 |
| TraesCS6A01G146200.3 | Wheat | nucleus | 38.81 | 8.12 |
| TraesCS6D01G135500.3 | Wheat | nucleus | 38.81 | 8.06 |
| PGSC0003DMT400008290 | Potato | nucleus | 46.27 | 8.02 |
| CDX82389 | Canola | nucleus | 35.82 | 7.88 |
| CDY16482 | Canola | nucleus | 24.63 | 7.5 |
| CDX77263 | Canola | nucleus | 24.63 | 7.33 |
| CDY32725 | Canola | nucleus | 33.58 | 7.22 |
| CDY02793 | Canola | nucleus | 33.58 | 7.19 |
| CDY05641 | Canola | nucleus | 23.88 | 7.17 |
| CDY11437 | Canola | nucleus | 22.39 | 7.14 |
| CDY29358 | Canola | nucleus | 26.87 | 7.13 |
| CDY33920 | Canola | nucleus | 22.39 | 6.93 |
| CDX76652 | Canola | nucleus | 21.64 | 6.92 |
| CDY04335 | Canola | nucleus | 26.87 | 6.82 |
| CDY67763 | Canola | nucleus | 20.9 | 4.71 |
| CDX98997 | Canola | nucleus | 20.9 | 4.67 |
| CDX70016 | Canola | nucleus | 20.9 | 4.67 |
| CDX81041 | Canola | nucleus | 16.42 | 3.89 |
| CDX78284 | Canola | nucleus | 16.42 | 3.87 |
| CDY14053 | Canola | nucleus | 19.4 | 3.48 |
| CDX86925 | Canola | nucleus | 14.93 | 2.95 |
| CDX82988 | Canola | nucleus | 4.48 | 2.32 |
| CDX68392 | Canola | nucleus | 4.48 | 2.29 |
| CDX73907 | Canola | nucleus | 2.24 | 2.22 |
| CDY61256 | Canola | nucleus | 4.48 | 2.19 |
| CDX73905 | Canola | nucleus | 1.49 | 2.0 |
| CDX98816 | Canola | nucleus | 3.73 | 1.92 |
| CDX99104 | Canola | nucleus | 3.73 | 1.72 |
| CDY32209 | Canola | nucleus | 5.97 | 1.69 |
| CDY34423 | Canola | nucleus | 5.97 | 1.68 |
| CDY08579 | Canola | nucleus | 2.99 | 1.65 |
| CDX80940 | Canola | nucleus | 2.99 | 1.64 |
| CDX79963 | Canola | nucleus | 2.99 | 1.62 |
| CDY53674 | Canola | nucleus | 2.99 | 1.61 |
| CDY52133 | Canola | nucleus | 2.99 | 1.6 |
| CDY00969 | Canola | nucleus | 2.99 | 1.41 |
| CDY30695 | Canola | nucleus | 4.48 | 0.8 |
| CDY36273 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX87845 | EnsemblPlantsGene:GSBRNA2T00147015001 | Gene3D:3.40.50.2300 | GO:A0A078DF30 | GO:GO:0000160 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | InterPro:CheY-like_superfamily | InterPro:IPR001789 | InterPro:Sig_transdc_resp-reg_receiver |
| PANTHER:PTHR43874 | PANTHER:PTHR43874:SF7 | PFAM:PF00072 | PFscan:PS50110 | ProteinID:CDX87845 | ProteinID:CDX87845.1 |
| SUPFAM:SSF52172 | UniParc:UPI0004EEFE65 | MapMan:35.1 | : | : | : |
Description
BnaC06g09070D
Coordinates
chrLK031852:-:601316..601840
Molecular Weight (calculated)
15282.7 Da
IEP (calculated)
6.919
GRAVY (calculated)
-0.226
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLPCNLYK EEFWVIICAV TTTEKAQIAL ELLRDNKNKF NLGISDVDMP DMDGFELLEL LVLSAHRHPK YVMEGAKHGS CNDILKSVRI EELKNIWQHL
101: VGKIMFKKMK SILTNGESQG NSDQNGVKNQ QCFI
101: VGKIMFKKMK SILTNGESQG NSDQNGVKNQ QCFI
001: MTVEQNLEAL DQFPVGMRVL AVDDDQTCLK ILESLLRHCQ YHVTTTNQAQ KALELLRENK NKFDLVISDV DMPDMDGFKL LELVGLEMDL PVIMLSAHSD
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
101: PKYVMKGVTH GACDYLLKPV RIEELKNIWQ HVVRSRFDKN RGSNNNGDKR DGSGNEGVGN SDQNNGKGNR KRKDQYNEDE DEDRDDNDDS CAQKKQRVVW
201: TVELHKKFVA AVNQLGYEKA MPKKILDLMN VEKLTRENVA SHLQKFRLYL KRISGVANQQ AIMANSELHF MQMNGLDGFH HRPIPVGSGQ YHGGAPAMRS
301: FPPNGILGRL NTPSGIGVRS LSSPPAGMFL QNQTDIGKFH HVSSLPLNHS DGGNILQGLP MPLEFDQLQT NNNKSRNMNS NKSIAGTSMA FPSFSTQQNS
401: LISAPNNNVV VLEGHPQATP PGFPGHQINK RLEHWSNAVS SSTHPPPPAH NSNSINHQFD VSPLPHSRPD PLEWNNVSSS YSIPFCDSAN TLSSPALDTT
501: NPRAFCRNTD FDSNTNVQPG VFYGPSTDAM ALLSSSNPKE GFVVGQQKLQ SGGFMVADAG SLDDIVNSTM KQEQSQGDLS GGDLGYGGFS SLRTCI
Arabidopsis Description
ARR12Two-component response regulator ARR12 [Source:UniProtKB/Swiss-Prot;Acc:P62598]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.