Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92102 | Canola | nucleus | 94.85 | 95.42 |
| CDY52720 | Canola | nucleus | 34.65 | 93.58 |
| CDY54632 | Canola | cytosol | 26.14 | 89.19 |
| CDX82391 | Canola | cytosol | 25.54 | 87.16 |
| CDY54630 | Canola | cytosol | 26.34 | 85.81 |
| CDX75892 | Canola | nucleus | 73.47 | 82.08 |
| Bra022183.1-P | Field mustard | nucleus | 98.81 | 73.27 |
| CDX82389 | Canola | nucleus | 81.19 | 67.32 |
| AT3G16857.2 | Thale cress | nucleus | 88.91 | 65.07 |
| CDY09718 | Canola | nucleus | 64.75 | 54.41 |
| CDX90546 | Canola | nucleus | 63.17 | 54.07 |
| CDY34423 | Canola | nucleus | 46.93 | 49.89 |
| CDY32209 | Canola | nucleus | 46.53 | 49.79 |
| CDX73905 | Canola | nucleus | 8.51 | 43.0 |
| PGSC0003DMT400065835 | Potato | nucleus | 57.23 | 42.81 |
| Solyc01g065540.2.1 | Tomato | nucleus | 57.23 | 42.69 |
| KRH12005 | Soybean | nucleus | 56.63 | 42.56 |
| KRH37035 | Soybean | nucleus | 55.84 | 41.9 |
| CDY64566 | Canola | nucleus | 29.31 | 39.36 |
| CDY09419 | Canola | nucleus | 29.11 | 38.99 |
| CDX87845 | Canola | cytosol, extracellular | 9.7 | 36.57 |
| GSMUA_Achr5P16510_001 | Banana | cytosol, nucleus, plastid | 15.45 | 36.11 |
| CDY56439 | Canola | nucleus | 19.6 | 36.0 |
| CDX86245 | Canola | nucleus | 19.41 | 35.9 |
| CDY68249 | Canola | nucleus | 29.7 | 34.32 |
| CDX96070 | Canola | nucleus | 32.67 | 32.16 |
| CDY01838 | Canola | nucleus | 31.68 | 32.0 |
| CDY28869 | Canola | nucleus | 31.68 | 31.56 |
| CDY07410 | Canola | nucleus | 31.49 | 31.24 |
| CDY13465 | Canola | nucleus | 31.49 | 30.7 |
| CDX73907 | Canola | nucleus | 8.12 | 30.37 |
| CDX72337 | Canola | nucleus | 31.09 | 30.02 |
| CDY70103 | Canola | nucleus | 32.87 | 28.77 |
| CDY35371 | Canola | nucleus | 33.07 | 28.74 |
| CDX68803 | Canola | nucleus | 28.91 | 28.57 |
| CDY02794 | Canola | nucleus | 26.53 | 28.09 |
| CDY33920 | Canola | nucleus | 22.18 | 25.87 |
| CDY05641 | Canola | nucleus | 21.78 | 24.66 |
| CDY16482 | Canola | nucleus | 21.39 | 24.55 |
| CDX76652 | Canola | nucleus | 20.0 | 24.11 |
| CDY11437 | Canola | nucleus | 19.8 | 23.81 |
| CDX77263 | Canola | nucleus | 21.19 | 23.78 |
| CDY32725 | Canola | nucleus | 29.31 | 23.76 |
| CDY02793 | Canola | nucleus | 29.11 | 23.48 |
| CDX79963 | Canola | nucleus | 11.29 | 23.08 |
| CDY53674 | Canola | nucleus | 11.29 | 22.98 |
| CDY08579 | Canola | nucleus | 10.89 | 22.73 |
| CDY49965 | Canola | mitochondrion | 15.05 | 22.55 |
| CDX80940 | Canola | nucleus | 10.69 | 22.13 |
| CDY52133 | Canola | nucleus | 10.89 | 22.0 |
| CDX98816 | Canola | nucleus | 11.29 | 21.84 |
| CDY00969 | Canola | nucleus | 12.28 | 21.83 |
| CDY29358 | Canola | nucleus | 21.19 | 21.19 |
| CDY61256 | Canola | nucleus | 11.49 | 21.17 |
| CDY04335 | Canola | nucleus | 21.78 | 20.83 |
| CDX99104 | Canola | nucleus | 11.68 | 20.34 |
| CDX68392 | Canola | nucleus | 10.49 | 20.23 |
| CDY36273 | Canola | mitochondrion | 9.5 | 20.08 |
| CDX82988 | Canola | nucleus | 9.9 | 19.3 |
| CDX98997 | Canola | nucleus | 22.77 | 19.2 |
| CDX70016 | Canola | nucleus | 22.57 | 19.0 |
| CDY67763 | Canola | nucleus | 21.78 | 18.52 |
| CDX81041 | Canola | nucleus | 19.41 | 17.31 |
| CDX78284 | Canola | nucleus | 19.01 | 16.9 |
| CDY14053 | Canola | nucleus | 20.99 | 14.17 |
| CDX86925 | Canola | nucleus | 15.45 | 11.52 |
| CDY30695 | Canola | nucleus | 11.88 | 7.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078E922 | EnsemblPlants:CDX95898 |
| ProteinID:CDX95898 | ProteinID:CDX95898.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00101896001 | InterPro:Homeobox-like_sf |
| InterPro:IPR001789 | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:Myb_dom_plants | PFAM:PF00072 | PFAM:PF00249 |
| PIRSF:PIRSF036392 | PFscan:PS50110 | PFscan:PS51294 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF23 | InterPro:Response_reg_B-typ_pln |
| InterPro:SANT/Myb | SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 |
| UniParc:UPI0004EDEF9C | SEG:seg | : | : | : | : |
Description
BnaC05g36490D
Coordinates
chrLK031891:-:1238063..1241851
Molecular Weight (calculated)
55032.0 Da
IEP (calculated)
6.284
GRAVY (calculated)
-0.452
Length
505 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNPSQGRGL GSGGGSSSGR NKGGEAVVEM FPSGLRVLVV DDDPTCLMIL ERMLRTCLYE VTKCNRAEMA LSLLRKNKHG FDIVISDVHM PDMDGFKLLE
101: HVGLEMDLPV IMMSADDSKS VVLKGVTHGA VDYLIKPVRM EALKNIWQHV VRKRRSEWSV PEHSGSIEET GQQQQQRGPA VSEDAADDNA SSVNNEGNNW
201: RSSSNNSRKR KEEEGDEQGD EDASNLKKPR VVWSVELHQQ FVAAVNQLGV EKAVPKKILE LMNVPGLTRE NVASHLQKYR IYLRRLGGVS QHQGNLNNSF
301: MTGQDASFGP LSSLNGFDLQ ALAVTGQLPA QSLAQLQAAG LGRPAMVSKS GLPRSGFSGR SSVAESSRVL PTSYTNLATQ QHSSTSVAFN SFQQELPVNS
401: FPLPSAPGLS VPTQVRKPHS SSSSYQEEQL TQPIMVPHHQ VYSNGGGGGS SVRVKSERDT AAMAFHEQYS NQEDLMSALL KQEGVAPVVD TEFDFDAYSI
501: DDIPV
101: HVGLEMDLPV IMMSADDSKS VVLKGVTHGA VDYLIKPVRM EALKNIWQHV VRKRRSEWSV PEHSGSIEET GQQQQQRGPA VSEDAADDNA SSVNNEGNNW
201: RSSSNNSRKR KEEEGDEQGD EDASNLKKPR VVWSVELHQQ FVAAVNQLGV EKAVPKKILE LMNVPGLTRE NVASHLQKYR IYLRRLGGVS QHQGNLNNSF
301: MTGQDASFGP LSSLNGFDLQ ALAVTGQLPA QSLAQLQAAG LGRPAMVSKS GLPRSGFSGR SSVAESSRVL PTSYTNLATQ QHSSTSVAFN SFQQELPVNS
401: FPLPSAPGLS VPTQVRKPHS SSSSYQEEQL TQPIMVPHHQ VYSNGGGGGS SVRVKSERDT AAMAFHEQYS NQEDLMSALL KQEGVAPVVD TEFDFDAYSI
501: DDIPV
001: MMNPSHGRGL GSAGGSSSGR NQGGGGETVV EMFPSGLRVL VVDDDPTCLM ILERMLRTCL YEVTKCNRAE MALSLLRKNK HGFDIVISDV HMPDMDGFKL
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQV
101: LEHVGLEMDL PVIMMSADDS KSVVLKGVTH GAVDYLIKPV RMEALKNIWQ HVVRKRRSEW SVPEHSGSIE ETGERQQQQH RGGGGGAAVS GGEDAVDDNS
201: SSVNEGNNWR SSSRKRKDEE GEEQGDDKDE DASNLKKPRV VWSVELHQQF VAAVNQLGVE KAVPKKILEL MNVPGLTREN VASHLQKYRI YLRRLGGVSQ
301: HQGNLNNSFM TGQDASFGPL STLNGFDLQA LAVTGQLPAQ SLAQLQAAGL GRPAMVSKSG LPVSSIVDER SIFSFDNTKT RFGEGLGHHG QQPQQQPQMN
401: LLHGVPTGLQ QQLPMGNRMS IQQQIAAVRA GNSVQNNGML MPLAGQQSLP RGPPPMLTSS QSSIRQPMLS NRISERSGFS GRNNIPESSR VLPTSYTNLT
501: TQHSSSSMPY NNFQPELPVN SFPLASAPGI SVPVRKATSY QEEVNSSEAG FTTPSYDMFT TRQNDWDLRN IGIAFDSHQD SESAAFSASE AYSSSSMSRH
601: NTTVAATEHG RNHQQPPSGM VQHHQVYADG NGGSVRVKSE RVATDTATMA FHEQYSNQED LMSALLKQV
Arabidopsis Description
ARR1Two-component response regulator ARR1 [Source:UniProtKB/Swiss-Prot;Acc:Q940D0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.