Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004076.1-P | Field mustard | nucleus | 97.44 | 97.05 |
| CDY07410 | Canola | nucleus | 97.44 | 97.05 |
| CDX96070 | Canola | nucleus | 84.42 | 83.43 |
| AT1G67710.1 | Thale cress | nucleus | 85.21 | 82.92 |
| CDY01838 | Canola | nucleus | 81.07 | 82.2 |
| CDY52720 | Canola | nucleus | 21.5 | 58.29 |
| CDY54630 | Canola | cytosol | 16.96 | 55.48 |
| CDY54632 | Canola | cytosol | 16.17 | 55.41 |
| CDX82391 | Canola | cytosol | 16.17 | 55.41 |
| GSMUA_Achr3P14630_001 | Banana | cytosol | 39.05 | 54.25 |
| KRG97483 | Soybean | nucleus | 44.77 | 49.89 |
| KRH31403 | Soybean | nucleus | 51.28 | 43.05 |
| PGSC0003DMT400031260 | Potato | nucleus | 48.92 | 42.76 |
| Solyc05g014260.2.1 | Tomato | nucleus | 48.92 | 42.69 |
| VIT_17s0000g10100.t01 | Wine grape | nucleus | 45.56 | 40.53 |
| KRH42619 | Soybean | nucleus | 40.63 | 40.39 |
| KRH58726 | Soybean | endoplasmic reticulum, extracellular | 50.49 | 40.31 |
| CDX73905 | Canola | nucleus | 7.89 | 40.0 |
| Os01t0904700-01 | Rice | nucleus | 44.97 | 39.18 |
| TraesCS3A01G391600.1 | Wheat | nucleus | 44.97 | 39.04 |
| TraesCS3B01G423600.1 | Wheat | nucleus | 44.97 | 39.04 |
| GSMUA_Achr8P32070_001 | Banana | nucleus | 41.81 | 38.9 |
| EES04061 | Sorghum | nucleus | 43.59 | 38.17 |
| CDY64566 | Canola | nucleus | 27.22 | 36.7 |
| TraesCS3D01G384500.2 | Wheat | nucleus | 44.97 | 36.6 |
| CDX87845 | Canola | cytosol, extracellular | 9.66 | 36.57 |
| VIT_17s0000g10110.t01 | Wine grape | nucleus | 32.54 | 36.5 |
| CDY09419 | Canola | nucleus | 27.02 | 36.34 |
| Zm00001d012128_P001 | Maize | nucleus | 43.2 | 36.32 |
| Zm00001d042463_P001 | Maize | nucleus | 43.59 | 35.94 |
| CDX75892 | Canola | nucleus | 30.18 | 33.85 |
| CDY56439 | Canola | nucleus | 17.55 | 32.36 |
| CDX86245 | Canola | nucleus | 17.36 | 32.23 |
| CDX95898 | Canola | nucleus | 31.56 | 31.68 |
| CDX92102 | Canola | nucleus | 31.16 | 31.47 |
| CDY68249 | Canola | nucleus | 27.02 | 31.35 |
| CDX73907 | Canola | nucleus | 7.5 | 28.15 |
| CDY13465 | Canola | nucleus | 28.6 | 27.99 |
| CDX72337 | Canola | nucleus | 28.4 | 27.53 |
| CDX68803 | Canola | nucleus | 27.61 | 27.4 |
| CDY70103 | Canola | nucleus | 30.97 | 27.21 |
| CDY35371 | Canola | nucleus | 30.77 | 26.85 |
| CDX82389 | Canola | nucleus | 32.15 | 26.77 |
| CDY02794 | Canola | nucleus | 25.05 | 26.62 |
| CDX90546 | Canola | nucleus | 30.18 | 25.93 |
| CDY09718 | Canola | nucleus | 30.37 | 25.62 |
| CDY33920 | Canola | nucleus | 20.51 | 24.02 |
| CDY05641 | Canola | nucleus | 19.92 | 22.65 |
| CDY16482 | Canola | nucleus | 19.13 | 22.05 |
| CDX77263 | Canola | nucleus | 19.53 | 22.0 |
| CDY32725 | Canola | nucleus | 27.02 | 21.99 |
| CDY02793 | Canola | nucleus | 27.02 | 21.89 |
| CDY49965 | Canola | mitochondrion | 14.2 | 21.36 |
| CDY08579 | Canola | nucleus | 10.06 | 21.07 |
| CDX79963 | Canola | nucleus | 10.26 | 21.05 |
| CDY53674 | Canola | nucleus | 10.26 | 20.97 |
| CDX80940 | Canola | nucleus | 10.06 | 20.9 |
| CDX98816 | Canola | nucleus | 10.65 | 20.69 |
| CDY52133 | Canola | nucleus | 10.06 | 20.4 |
| CDX76652 | Canola | nucleus | 16.57 | 20.05 |
| CDY11437 | Canola | nucleus | 16.37 | 19.76 |
| CDY29358 | Canola | nucleus | 19.33 | 19.41 |
| CDY04335 | Canola | nucleus | 20.12 | 19.32 |
| CDY00969 | Canola | nucleus | 10.65 | 19.01 |
| CDX68392 | Canola | nucleus | 9.07 | 17.56 |
| CDX82988 | Canola | nucleus | 8.88 | 17.37 |
| CDY34423 | Canola | nucleus | 16.17 | 17.26 |
| CDY32209 | Canola | nucleus | 15.78 | 16.95 |
| CDY36273 | Canola | mitochondrion | 7.89 | 16.74 |
| CDY61256 | Canola | nucleus | 8.88 | 16.42 |
| CDX99104 | Canola | nucleus | 9.27 | 16.21 |
| CDX98997 | Canola | nucleus | 19.13 | 16.19 |
| CDX70016 | Canola | nucleus | 18.93 | 16.0 |
| CDY67763 | Canola | nucleus | 18.34 | 15.66 |
| CDX81041 | Canola | nucleus | 16.96 | 15.19 |
| CDX78284 | Canola | nucleus | 16.96 | 15.14 |
| CDY14053 | Canola | nucleus | 17.95 | 12.17 |
| CDX86925 | Canola | nucleus | 13.81 | 10.34 |
| CDY30695 | Canola | nucleus | 11.05 | 7.44 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078GUQ6 | UniProt:A0A078GUQ6 |
| EnsemblPlants:CDY28869 | ProteinID:CDY28869 | ProteinID:CDY28869.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00041550001 |
| InterPro:Homeobox-like_sf | InterPro:IPR001789 | InterPro:Myb_dom_plants | PFAM:PF00072 | PFAM:PF00249 | PIRSF:PIRSF036392 |
| PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF27 | InterPro:Response_reg_B-typ_pln | InterPro:SANT/Myb | SMART:SM00448 |
| SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI0004EE0E3E | SEG:seg |
Description
BnaC06g26570DTwo-component response regulator [Source:UniProtKB/TrEMBL;Acc:A0A078GUQ6]
Coordinates
chrLK032227:+:269062..271500
Molecular Weight (calculated)
57129.8 Da
IEP (calculated)
5.087
GRAVY (calculated)
-0.505
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKGFSPVGL RVLVVDDDPT WLKILEKMLK KCSYEVTTCG LAREALRLLR ERKDGFDIVI SDVNMPDMDG FKLLEHVGLE LDLPVIMMSV DGETSRVMKG
101: VQHGACDYLL KPIRMKELKI IWQHVLRKKL QEVRDIEGCC YDVGADWFTQ AQFLGGGEDV SFGKKRKDFD FEKKLFQDES DQSSSSKKAR VVWSYELHQK
201: FVNAVNQIGC DHKAGPKKIL DLMNIPWLTR ENVASHLQKY RLYLSRLEKG KEIKCYSGGV KNMDSPPKDA EINSGHQSPG KSSSYAFLKA TETDPKQLAP
301: ASVSDPTSGV HMPPKAKKTR IGYDPPISSG VFDSLLPWND VPDPLESKPP ILYENSFLQQ QPLPSQSSYV ANSAPSLMQE EMKPSYVNED EFLMPQDKNS
401: TVILQDMDLS APFSSNATSN TDSIPGSLNW ELPEAHHSGS LDTDLDFTWL HGEHFFANSG LQNFQFQDYT SSTSLLSEPP PHLWYGNDRL PDPDEYTLMV
501: DQGLFIS
101: VQHGACDYLL KPIRMKELKI IWQHVLRKKL QEVRDIEGCC YDVGADWFTQ AQFLGGGEDV SFGKKRKDFD FEKKLFQDES DQSSSSKKAR VVWSYELHQK
201: FVNAVNQIGC DHKAGPKKIL DLMNIPWLTR ENVASHLQKY RLYLSRLEKG KEIKCYSGGV KNMDSPPKDA EINSGHQSPG KSSSYAFLKA TETDPKQLAP
301: ASVSDPTSGV HMPPKAKKTR IGYDPPISSG VFDSLLPWND VPDPLESKPP ILYENSFLQQ QPLPSQSSYV ANSAPSLMQE EMKPSYVNED EFLMPQDKNS
401: TVILQDMDLS APFSSNATSN TDSIPGSLNW ELPEAHHSGS LDTDLDFTWL HGEHFFANSG LQNFQFQDYT SSTSLLSEPP PHLWYGNDRL PDPDEYTLMV
501: DQGLFIS
001: MEKSGFSPVG LRVLVVDDDP TWLKILEKML KKCSYEVTTC GLAREALRLL RERKDGYDIV ISDVNMPDMD GFKLLEHVGL ELDLPVIMMS VDGETSRVMK
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S
101: GVQHGACDYL LKPIRMKELK IIWQHVLRKK LQEVRDIEGC GYEGGADWIT RYDEAHFLGG GEDVSFGKKR KDFDFEKKLL QDESDPSSSS SKKARVVWSF
201: ELHHKFVNAV NQIGCDHKAG PKKILDLMNV PWLTRENVAS HLQKYRLYLS RLEKGKELKC YSGGVKNADS SPKDVEVNSG YQSPGRSSYV FSGGNSLIQK
301: ATEIDPKPLA SASLSDLNTD VIMPPKTKKT RIGFDPPISS SAFDSLLPWN DVPEVLESKP VLYENSFLQQ QPLPSQSSYV ANSAPSLMEE EMKPPYETPA
401: GGSSVNADEF LMPQDKIPTV TLQDLDPSAM KLQEFNTEAI LRSLNWELPE SHHSVSLDTD LDLTWLQGER FLANTGLQFQ DYSSSPSLLS ELPAHLNWYG
501: NERLPDPDEY SFMVDQGLFI S
Arabidopsis Description
ARR11Two-component response regulator [Source:UniProtKB/TrEMBL;Acc:Q0WRT0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.