Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014172.1-P | Field mustard | nucleus | 97.5 | 95.55 |
| CDX77263 | Canola | nucleus | 95.0 | 92.89 |
| CDY29358 | Canola | nucleus | 59.55 | 51.88 |
| CDY04335 | Canola | nucleus | 56.59 | 47.16 |
| CDY52720 | Canola | nucleus | 15.68 | 36.9 |
| AT1G49190.2 | Thale cress | nucleus | 51.82 | 36.66 |
| CDY54630 | Canola | cytosol | 12.73 | 36.13 |
| CDY54632 | Canola | cytosol | 12.05 | 35.81 |
| CDX82391 | Canola | cytosol | 11.82 | 35.14 |
| CDX76652 | Canola | nucleus | 32.73 | 34.37 |
| CDY11437 | Canola | nucleus | 32.05 | 33.57 |
| VIT_11s0052g01160.t01 | Wine grape | cytosol | 15.45 | 31.48 |
| CDX73907 | Canola | nucleus | 9.32 | 30.37 |
| CDX73905 | Canola | nucleus | 6.82 | 30.0 |
| CDY56439 | Canola | nucleus | 16.14 | 25.82 |
| CDX86245 | Canola | nucleus | 15.91 | 25.64 |
| Zm00001d032784_P001 | Maize | nucleus | 19.09 | 24.93 |
| CDX87845 | Canola | cytosol, extracellular | 7.5 | 24.63 |
| KXG38401 | Sorghum | nucleus | 19.32 | 24.5 |
| CDY64566 | Canola | nucleus | 20.23 | 23.67 |
| GSMUA_Achr5P13050_001 | Banana | cytosol | 12.27 | 23.58 |
| CDY09419 | Canola | nucleus | 20.0 | 23.34 |
| CDX75892 | Canola | nucleus | 23.64 | 23.01 |
| CDX95898 | Canola | nucleus | 24.55 | 21.39 |
| CDX92102 | Canola | nucleus | 24.32 | 21.31 |
| CDY68249 | Canola | nucleus | 20.0 | 20.14 |
| CDY05641 | Canola | nucleus | 20.0 | 19.73 |
| VIT_07s0005g01010.t01 | Wine grape | nucleus | 23.86 | 19.66 |
| CDY33920 | Canola | nucleus | 19.09 | 19.4 |
| CDY28869 | Canola | nucleus | 22.05 | 19.13 |
| CDY07410 | Canola | nucleus | 22.05 | 19.06 |
| CDY01838 | Canola | nucleus | 21.14 | 18.6 |
| CDY02794 | Canola | nucleus | 20.0 | 18.45 |
| PGSC0003DMT400090747 | Potato | nucleus | 23.41 | 18.43 |
| CDX68803 | Canola | nucleus | 21.36 | 18.4 |
| Solyc12g099380.1.1 | Tomato | nucleus | 23.18 | 18.38 |
| CDY13465 | Canola | nucleus | 21.59 | 18.34 |
| CDX96070 | Canola | nucleus | 21.36 | 18.32 |
| Os10t0463400-01 | Rice | nucleus | 14.09 | 18.18 |
| CDX72337 | Canola | nucleus | 21.59 | 18.16 |
| CDX90546 | Canola | nucleus | 24.09 | 17.97 |
| CDX82389 | Canola | nucleus | 24.32 | 17.57 |
| CDX68392 | Canola | nucleus | 10.45 | 17.56 |
| CDY09718 | Canola | nucleus | 23.86 | 17.47 |
| CDX82988 | Canola | nucleus | 10.0 | 16.99 |
| CDY70103 | Canola | nucleus | 21.82 | 16.64 |
| CDY35371 | Canola | nucleus | 21.82 | 16.52 |
| CDY61256 | Canola | nucleus | 9.77 | 15.69 |
| CDX79963 | Canola | nucleus | 8.64 | 15.38 |
| CDY53674 | Canola | nucleus | 8.64 | 15.32 |
| CDY52133 | Canola | nucleus | 8.64 | 15.2 |
| CDX99104 | Canola | nucleus | 10.0 | 15.17 |
| CDX80940 | Canola | nucleus | 8.41 | 15.16 |
| CDY02793 | Canola | nucleus | 21.14 | 14.86 |
| CDY32725 | Canola | nucleus | 20.91 | 14.77 |
| CDY49965 | Canola | mitochondrion | 11.14 | 14.54 |
| CDY08579 | Canola | nucleus | 7.95 | 14.46 |
| CDX98997 | Canola | nucleus | 19.55 | 14.36 |
| CDX81041 | Canola | nucleus | 18.41 | 14.31 |
| CDY67763 | Canola | nucleus | 19.32 | 14.31 |
| CDX70016 | Canola | nucleus | 19.32 | 14.17 |
| CDX78284 | Canola | nucleus | 18.18 | 14.08 |
| CDY36273 | Canola | mitochondrion | 7.5 | 13.81 |
| CDX98816 | Canola | nucleus | 8.18 | 13.79 |
| CDY32209 | Canola | nucleus | 14.32 | 13.35 |
| CDY34423 | Canola | nucleus | 14.09 | 13.05 |
| CDY00969 | Canola | nucleus | 8.41 | 13.03 |
| CDY14053 | Canola | nucleus | 18.41 | 10.83 |
| CDX86925 | Canola | nucleus | 15.23 | 9.9 |
| CDY30695 | Canola | nucleus | 12.5 | 7.3 |
| TraesCS7A01G539600.1 | Wheat | nucleus | 4.32 | 5.62 |
| TraesCSU01G179800.1 | Wheat | nucleus, plastid | 1.14 | 1.51 |
| TraesCSU01G196300.1 | Wheat | nucleus, plastid | 1.14 | 1.51 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:11.4.2.4 | MapMan:15.5.23 | Gene3D:3.40.50.2300 | GO:A0A078FUH1 | UniProt:A0A078FUH1 |
| EnsemblPlants:CDY16482 | ProteinID:CDY16482 | ProteinID:CDY16482.1 | InterPro:CheY-like_superfamily | GO:GO:0000160 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00091069001 | InterPro:Homeobox-like_sf |
| InterPro:IPR001789 | InterPro:Myb_dom_plants | PFAM:PF00072 | PFscan:PS50110 | PANTHER:PTHR43874 | PANTHER:PTHR43874:SF23 |
| SMART:SM00448 | SUPFAM:SSF46689 | SUPFAM:SSF52172 | InterPro:Sig_transdc_resp-reg_receiver | TIGRFAMs:TIGR01557 | UniParc:UPI0004EE114A |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g02850DBnaA08g02850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FUH1]
Coordinates
chrLK032064:+:345692..347431
Molecular Weight (calculated)
50276.7 Da
IEP (calculated)
5.422
GRAVY (calculated)
-0.585
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIAHITEDG DKALFLQQET SEINSPLNEF PPSTNVLVVD ANLSTLLDMK EIMERCAYHV TAYADAEEAI AFLTKCKHEI NIVIWDYHMP GINGLQALAI
101: IGSKMDLPVV IMSGDDQTES VMNAMVHGAC HCVMKPVRKE IIATIWQHIV RKRMMSKPGL VPPVKDDSVT VDQDDSEQSI DKMIEEKATN KRTMICIEET
201: QPMQSHLVKS NGSDQDDDDS RSVRNYNYEQ SIDKKKERYL KRPRISWTGD LQQKFLEAID IVGGPKKASP KVLLKCLHDM NIEGLTRNNV SSHLQKYRLS
301: LEENKIPQQF PETGWSSLSR PSPFLGMNNG FIAPTSLRNW PAVYPVQDNQ YQNGYLAINN NQFVTNNMPG FPYSENDHHL QQQHQQRQYQ LSNHVMNYMM
401: RNEPQQAYNS IGLTDLEPNI YPSLPYDPNE FLFDGYNFSN
101: IGSKMDLPVV IMSGDDQTES VMNAMVHGAC HCVMKPVRKE IIATIWQHIV RKRMMSKPGL VPPVKDDSVT VDQDDSEQSI DKMIEEKATN KRTMICIEET
201: QPMQSHLVKS NGSDQDDDDS RSVRNYNYEQ SIDKKKERYL KRPRISWTGD LQQKFLEAID IVGGPKKASP KVLLKCLHDM NIEGLTRNNV SSHLQKYRLS
301: LEENKIPQQF PETGWSSLSR PSPFLGMNNG FIAPTSLRNW PAVYPVQDNQ YQNGYLAINN NQFVTNNMPG FPYSENDHHL QQQHQQRQYQ LSNHVMNYMM
401: RNEPQQAYNS IGLTDLEPNI YPSLPYDPNE FLFDGYNFSN
001: MLVGKISGYE DNTRSLERET SEITSLLSQF PGNTNVLVVD TNFTTLLNMK QIMKQYAYQV SIETDAEKAL AFLTSCKHEI NIVIWDFHMP GIDGLQALKS
101: ITSKLDLPVV IMSDDNQTES VMKATFYGAC DYVVKPVKEE VMANIWQHIV RKRLIFKPDV APPKPRMTWS EVFQPVQSHL VPTDGLDRDH FDSITINGGN
201: GIQNMEKKQG KKPRKPRMTW TEELHQKFLE AIEIIGGIEK ANPKVLVECL QEMRIEGITR SNVASHLQKH RINLEENQIP QQTQGNGWAT AYGTLAPSLQ
301: GSDNVNTTIP SYLMNGPATL NQIQQNQYQN GFLTMNNNQI ITNPPPPLPY LDHHHQQQHQ SSPQFNYLMN NEELLQASGL SATDLELTYP SLPYDPQEYL
401: INGYNYN
101: ITSKLDLPVV IMSDDNQTES VMKATFYGAC DYVVKPVKEE VMANIWQHIV RKRLIFKPDV APPKPRMTWS EVFQPVQSHL VPTDGLDRDH FDSITINGGN
201: GIQNMEKKQG KKPRKPRMTW TEELHQKFLE AIEIIGGIEK ANPKVLVECL QEMRIEGITR SNVASHLQKH RINLEENQIP QQTQGNGWAT AYGTLAPSLQ
301: GSDNVNTTIP SYLMNGPATL NQIQQNQYQN GFLTMNNNQI ITNPPPPLPY LDHHHQQQHQ SSPQFNYLMN NEELLQASGL SATDLELTYP SLPYDPQEYL
401: INGYNYN
Arabidopsis Description
RR19response regulator 19 [Source:TAIR;Acc:AT1G49190]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.